Elizabethkingia ursingii: BBD34_03615
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Entry
BBD34_03615 CDS
T05036
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ego
Elizabethkingia ursingii
Pathway
ego03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBD34_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ego03019
]
BBD34_03615
03016 Transfer RNA biogenesis [BR:
ego03016
]
BBD34_03615
Enzymes [BR:
ego01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BBD34_03615
Messenger RNA biogenesis [BR:
ego03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBD34_03615
Transfer RNA biogenesis [BR:
ego03016
]
Prokaryotic type
tRNA degradation factors
BBD34_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AQX07786
UniProt:
A0AAJ3NEM0
LinkDB
All DBs
Position
complement(795159..797348)
Genome browser
AA seq
729 aa
AA seq
DB search
MSIPQAITEKIVLRDGREITIETGKLAKQADGSVVVRMGNTMLMATVVANKEANPGVDFL
PLTVDYREKFYAGGKIPGNFFRREARPSDQEILTMRLVDRVLRPLFPEDFHAEVQVMISL
ISYDGQSIPDDLAGLAASAAIAITDIPFNGPMSEVRVVRIDGKLSVNPSYEQLSTADIDI
MVGATKDSIVMVEGEMKEISEQEMLEAIKFAHEEIKIQIEAQERLAAKVGKAFPKREYNH
EDHDEEIREKVWKECYDKVYEVAKSPSNKEERGEKFKAVLEEFLAQYTDEEELARVTPFV
KVYYHDVEKEAMRQMILNENIRLDGRDPKTIRPIWSEVDYLPGAHGSAVFTRGETQSLTA
VTLGSSKDANMVDSVISQHDEKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALAN
VIPAEVPYTIRIVSDILESNGSSSMATVCAGTLALMDAGIQISQPVSGIAMGLITDPKSG
KWTVLSDILGDEDHLGDMDFKVTGSENGITACQMDIKIQGLSMDIMENALMQAKEGRLHI
LGKILETIDTPRADVKPHAPKMEMLEVSKDFIGAIIGPGGKNIQQLQKDTDTVISIEEIG
EIGRVEIAGTNREKINEAIARINDITFVPVVGEVYKGKVVKVMDFGAFVQLKKGTEGLLH
ISEIEWKRLDTVPYKEGDEVEVKFMGYDDRKKMKLSRKVLLPRPPKPEGKPKTEATEAKT
EGDKPAEQA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacctcaagcaattacagaaaaaattgtactaagagatggtcgcgagattacc
atcgaaaccggaaaacttgcaaagcaggcagacggttcagttgtcgttagaatgggcaac
actatgctaatggctacagttgtagcaaacaaagaagctaatccaggagtggattttctt
cctcttacagtagattacagagagaaattttatgctggtggaaagattccggggaacttc
ttcagaagagaagcaagaccttcggatcaggaaatcctaacaatgcgtttagtagacaga
gttttacgtccgcttttccctgaagatttccatgctgaagttcaggtaatgatttccctt
atttcttatgatgggcaatctattccggatgacttagcaggtcttgcagcatctgcagct
attgctattacagatattcctttcaacggaccaatgtctgaagttagagtagtaagaatc
gacggaaaactttcagttaacccaagctacgagcagctttctacagctgatatcgacatc
atggtaggagctacaaaagactctatcgtaatggtagaaggggagatgaaggagatttct
gaacaggaaatgttagaagcaattaaatttgcacacgaagagatcaaaattcagatcgaa
gctcaggaaagattagcagctaaagtcggaaaagctttccctaaaagagaatacaaccac
gaagatcacgatgaagaaattcgtgagaaagtatggaaagagtgctacgacaaagtatac
gaagtagctaaatctccatctaacaaagaagaaagaggcgaaaaattcaaagctgtttta
gaagaatttttagctcaatatacagacgaagaagaattagcacgtgtaacaccttttgtt
aaagtatactaccacgatgtagaaaaagaggcaatgcgtcagatgattcttaacgaaaac
atccgtttggatggtcgtgatcctaaaactatccgtccgatctggtctgaggtagattac
cttcctggagctcacggttcagcagtatttacaagaggagaaactcagtctctaacagca
gtaactttaggttcttctaaagatgctaacatggtagacagcgtaatttcgcaacacgac
gagaaattctttttacattataacttcccgccattctctacaggtgaagcaagaccttta
agaggtacttccagaagagaagttggtcacggtaaccttgctcagagagctttggctaac
gttatcccggcagaagttccttatactatccgtatcgtttccgatattttagaatctaac
ggttcttcttctatggcaactgtttgtgctggtacactagcattaatggatgcaggtatt
cagatttcacaacctgtttcaggtattgcaatgggattgattacagatcctaagtctggt
aagtggacagttctttctgatatcttaggagatgaagatcacttaggtgatatggacttt
aaagtaacaggttcagaaaacggaatcactgcttgtcagatggatatcaaaatccagggt
ctatccatggatatcatggaaaatgccttaatgcaagctaaagaaggacgtcttcatatt
cttggtaaaatccttgaaacaattgatacacctagagcagatgttaaaccacacgctccg
aaaatggaaatgcttgaagtttctaaagacttcatcggtgctattatcgggcctggaggt
aaaaatatccagcaattacagaaagatacagatactgttatctctattgaagaaatcgga
gagatcggtagagttgaaatcgcaggtactaaccgtgagaagatcaacgaagcgattgca
agaattaatgatattaccttcgttcctgttgtaggagaagtttacaaaggtaaagttgtt
aaggtaatggatttcggagctttcgttcagcttaaaaaaggtactgaaggtcttcttcat
atctctgagatcgaatggaagagattggatacagttccgtacaaagaaggtgatgaagta
gaagtgaaattcatgggttacgatgatcgtaagaaaatgaagctttcaagaaaagtactt
cttccaagacctccaaagccggaaggaaaaccaaaaactgaagcaacagaagctaaaact
gaaggtgacaaacctgcagagcaagcataa
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