KEGG   Elizabethkingia ursingii: BBD34_06250
Entry
BBD34_06250       CDS       T05036                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ego  Elizabethkingia ursingii
Pathway
ego02020  Two-component system
ego02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ego00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BBD34_06250
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BBD34_06250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ego03021]
    BBD34_06250
Transcription machinery [BR:ego03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BBD34_06250
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID Med9 Carn_acyltransf Ubiquitin_PRKD1_N LacI
Other DBs
NCBI-ProteinID: AQX08271
UniProt: A0AAJ3TMV9
LinkDB
Position
complement(1365828..1367291)
AA seq 487 aa
MLKQNLQIKLGQKMAPQQIQLMKLIQLHTLEFEEELQRELEENPALEKAVDEAKEDEYSD
IDSSYDDEGTESIETDFDVNEYIFDDEPSYKTAASNYSPDDEEFDNQSLLTEGQSLYDYL
IEQIRLTKIGEEDLKIAEYIIGNLDNDGYLRRDIKSLVNDMAFSLGVYTTPENVEDVLTN
YVQKLDPPGVAARDLKECLLLQIEKKVSGNPAVSLAHNILLHQFDALSNKHYNKIMHKYD
VEEDDLKDALDEISKLSPKVGGNFDTQTITINQEIIPDFVINVKDGKVTAALNSKNAPQL
RVSDEYKEILTTYSHDKTSQEHKQAALFIKQKLDAAKWYIDAINQRQNTLMQTINAIIRL
QKDYFITGDDKSIKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKNLFSDSLTN
DDGEEVSTKEIKNHLQDIIDKENKRKPYTDDALVGMLKDKGYNIARRTIAKYREQLNIPV
ARLRKEL
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgctgaaacaaaatttacagataaaacttggccagaaaatggcaccacaacaaattcag
ttgatgaagcttattcagcttcatactcttgaatttgaagaagaattgcaacgggagctg
gaagaaaatccggcgttggaaaaagctgtggacgaagccaaggaagatgaatattcggat
attgatagtagttatgatgatgaaggaacagagtctatagaaactgatttcgatgtgaac
gaatacatttttgatgacgaaccttcttataaaactgccgcaagtaattactcaccagac
gatgaggaattcgataaccaatcgctgcttacagaaggacagtccttatacgattacctt
atagagcagatccggttgacgaaaatcggcgaggaggatctaaaaatagcagaatatatt
ataggtaacctggataatgatggttatctgagaagagatataaagtctttggttaacgat
atggctttttcattaggagtatatacgacacctgaaaatgtagaagacgtattaaccaat
tatgtacaaaaactggatccgccaggagtagcagcaagagatctgaaagaatgtcttctg
ctccagattgagaaaaaagtaagcggaaatccggcagtgtcattagcacataatattttg
cttcaccagtttgatgctttaagtaacaagcattataacaaaatcatgcataagtatgat
gtggaggaggatgatctgaaagatgcgcttgatgaaatctctaagttatctcctaaagtt
ggtggtaatttcgatacacagacaattacaatcaaccaggaaattattccggattttgta
atcaatgtaaaggacggaaaagttacagcggcacttaatagtaagaatgctcctcagcta
cgtgtctcagatgagtataaagagattttaacaacttactcacacgataaaacatcccag
gagcataagcaggcagctttgtttatcaaacaaaagcttgatgctgcaaaatggtatata
gatgctattaatcagcgccagaatacattgatgcaaaccattaatgctattataaggtta
cagaaagattactttattaccggagatgataaaagtataaagccaatgattttgaaagat
gtggcagatattacaggttttgatatttctacaatttcccgtgtggtgaaaagtaaatat
gcagatacacctaacggaatcgtttatctgaagaatcttttctcggatagtcttacaaat
gacgatggtgaagaggtttcaaccaaagagattaaaaaccacctgcaggatattatagac
aaggaaaataaaagaaaaccttataccgatgatgcattagtaggaatgctgaaagataaa
ggatacaatattgcccgacgtactattgctaaatacagagagcagttaaatattccggta
gcaagattaagaaaagaattataa

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