Elizabethkingia ursingii: BBD34_10375
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Entry
BBD34_10375 CDS
T05036
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ego
Elizabethkingia ursingii
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ego03032
]
BBD34_10375
03400 DNA repair and recombination proteins [BR:
ego03400
]
BBD34_10375
Enzymes [BR:
ego01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BBD34_10375
DNA replication proteins [BR:
ego03032
]
Prokaryotic type
DNA Topoisomerases
BBD34_10375
DNA repair and recombination proteins [BR:
ego03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBD34_10375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AQX09028
UniProt:
A0AAJ3NDG0
LinkDB
All DBs
Position
complement(2278914..2281454)
Genome browser
AA seq
846 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGNDFEVTSSMGHIRDLPKKGMGINLETFTPDYEVSPDKK
KLVTELKSLAKKAEMVWLASDEDREGEAIAWHLAEELKLKEDKTKRIVFHEITKNAILKA
IENPRKIDNNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IHGFQSQASYKVEGTFLNDEKKEILAKLKKDFSTEQEAESFLNQCSTADFKVLNVEKKPG
QRSASAPFTTSTLQQEASNRLGYSVTSTMRVAQRLYEEGYITYMRTDSVNLSQEAINSAK
ATITKEFGEEYSAPRNYTTKNASAQEAHEAIRPTDFGVKAVGDAQLNKLYQLIYKRAMAS
QMANAKIEKTVIEIGNQKLPQHFEATGEVIIFDGFLKVYGITKNEEEDDENDDKLLPKVN
IGEALKYKKIIATEKYTKAPARFTEASLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IMAKEREIVKLTLTSSLKKETLTEKYGADKNKFLPTDIGVVVNDFLVDNFNEVLDYGFTA
RVEEAFDIIAEGNRAWKDVMTEFYGKFHPRIADVEENADRANGDRILGVDPKTGKNVHAR
IGRFGAMIQIGETDDEEKPIFASLMPNQNITTITFEEAMELFKIPFNLNDYEGKEVVVGV
GRFGPYIKWGEAYISIPKTEDPLSVDNDRAIEIIEEKKRADAPIATYKGEPVTKGTGRFG
PFIKYKDIFVNVPKKYDFNNLSQSDINELIDAKLEKEANRYIQQWEDQKVSLENGRWGPF
IRFGKKMLKIPLKGKGEKYTAEDLQDISFDEVKKWIIAQDETAFKEKPKAKKAPAKKTAA
KKPSKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatctcgtaattgtggagtcccctgcgaaggctaagacgatacagaagtat
cttggtaatgactttgaagtaacctctagtatgggacacatccgtgatcttcctaaaaaa
ggcatgggtattaaccttgaaacatttactcctgattacgaagtttctccggataagaag
aagctcgttacagagcttaagtctttagctaaaaaagccgagatggtatggctggcttcc
gatgaagaccgcgagggggaagctattgcatggcatctggcggaggaattaaaattaaaa
gaagataaaactaaaagaattgtatttcatgagattactaagaatgcaattcttaaagct
atagagaatccgagaaaaatagacaataatcttgtcaatgctcaacaggcaagaagagta
ctggatagaattgtaggttttgagatgtctcctgttttatggaaaaaagtaaaaccaggt
ctttctgcagggcgtgtacagtcggtagcagtacgtcttgttgttgaaagagaaaaagaa
atccacggattccagtctcaggcttcttataaggttgaaggaactttccttaacgacgag
aagaaagaaattttagcaaaactaaaaaaggacttctctacagaacaggaagccgaatct
ttcctgaaccaatgtagcactgcagacttcaaagttttaaatgtagagaaaaagccagga
caacgttctgcttctgctccgtttaccacttctactctacagcaggaagcctcaaacaga
ttaggatattccgtaacttctacgatgcgtgtagcacaacgtctatatgaagaaggttac
attacctatatgagaacggacagtgttaacctttctcaggaagctattaattcggcaaaa
gcaactattacaaaagaattcggggaggaatattctgcaccgagaaactatactactaag
aatgcatctgctcaggaagcgcacgaagcaattcgtcctaccgattttggagtaaaagca
gtaggagatgcacagcttaataaattataccagctaatatataaaagagcaatggctagt
caaatggccaatgctaagattgagaaaacagtaattgagataggaaaccagaaacttcca
caacattttgaggcaactggtgaagtaattattttcgatggtttcttaaaagtatatggt
attactaaaaatgaggaggaagatgatgagaacgacgacaaacttcttccaaaagtaaat
atcggtgaggctcttaaatacaaaaaaataattgctaccgagaaatacacaaaagctcct
gcaagatttacagaagcatcactggtaagaaaactggaagaacttggaatcggaagacct
tctacttatgctccaactatccagacgattcagaatcgtgagtatgtggacaagagagaa
attatggctaaggaacgtgaaatcgttaagcttactttaacttcttctctgaaaaaagaa
acacttacggaaaagtatggtgctgataaaaacaaatttttaccaactgatataggtgtt
gttgttaatgatttccttgttgacaacttcaacgaagttcttgattacggatttacagct
cgtgttgaggaagctttcgatattattgcggaaggaaacagagcatggaaagatgtaatg
actgaattctatgggaaatttcatccaagaattgcagatgtagaagaaaatgctgacaga
gcaaatggtgaccgtatattgggtgtagatcctaaaacgggcaaaaatgtacatgcaaga
attggaagatttggcgctatgatccaaattggagaaacagatgatgaagagaaaccaatc
tttgcttctctgatgcctaatcagaatatcactacaattacttttgaagaagcaatggag
cttttcaaaataccttttaatcttaacgactatgaaggtaaagaagttgtagttggtgtt
ggacgttttgggccttatatcaaatggggagaagcttatatcagcattcctaaaactgaa
gaccctctatctgtagacaatgacagagcaatcgagattatagaagaaaagaagagagct
gatgctcctatcgcaacttataaaggcgagccagtaacaaaaggaaccggaagattcggg
cctttcataaaatataaggacatctttgtaaacgttccgaagaaatatgattttaataat
ctttctcaaagtgacatcaacgaactaattgatgccaaactggaaaaagaagctaacaga
tatattcagcaatgggaggaccagaaggtttctcttgaaaacggaagatggggacctttc
attcgttttggaaagaaaatgctgaaaattccattgaaaggaaaaggagaaaaatatact
gctgaagatctgcaggatatttccttcgacgaagtaaagaaatggattattgctcaggac
gaaactgcttttaaagaaaaaccaaaagcaaaaaaagcgcctgccaagaaaactgctgct
aaaaaaccttctaaaaaataa
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