Elizabethkingia ursingii: BBD34_11900
Help
Entry
BBD34_11900 CDS
T05036
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ego
Elizabethkingia ursingii
Pathway
ego03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBD34_11900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ego03019
]
BBD34_11900
03110 Chaperones and folding catalysts [BR:
ego03110
]
BBD34_11900
03029 Mitochondrial biogenesis [BR:
ego03029
]
BBD34_11900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ego04147
]
BBD34_11900
Enzymes [BR:
ego01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BBD34_11900
Messenger RNA biogenesis [BR:
ego03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BBD34_11900
Chaperones and folding catalysts [BR:
ego03110
]
Heat shock proteins
HSP60 / Chaperonin
BBD34_11900
Mitochondrial biogenesis [BR:
ego03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BBD34_11900
Exosome [BR:
ego04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BBD34_11900
Exosomal proteins of other body fluids (saliva and urine)
BBD34_11900
Exosomal proteins of breast cancer cells
BBD34_11900
Exosomal proteins of colorectal cancer cells
BBD34_11900
Exosomal proteins of bladder cancer cells
BBD34_11900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
REF
Motif
Other DBs
NCBI-ProteinID:
AQX09304
LinkDB
All DBs
Position
complement(2586955..2588580)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE
LEDKVENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVVAVVKNLQSQSQSVGDSSEKIEQVASISANNDDTIGTLIAEAFGKVGKEGVITVEEA
KGTDTTVDVVEGMQFDRGYQSPYFVTNPEKMVAELDNPYILLVEKKISSMKELLPVLEPV
AQGGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEEQGFTMENITLDMLGTAEKVSIDKDNTTIVNGGGEEAKIKGRVAQIKAQMETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAISSLDNLTGANADETTGIKIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGTGDFGYNA
KTDEYVNMLEAGIIDPTKVTRVALENAASVSGMLLTTECVITEVKKDEPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattcgatattgaatcaagagacgccctaaaaagaggtgttgat
gcattagcaaatgcagtaaaagtaacattaggtcctaaaggtagaaacgtagtaatcgaa
aaatctttcggtgcaccacacgttacaaaggatggggtttctgtagctaaagaaatcgaa
cttgaagacaaagtagaaaacatgggagcgcaaatggtaaaagaagtagcttccaaaact
aatgatatcgcaggtgacggtactactaccgcaactgtattggcacaggctatcgtaaga
gaaggtcttaagaacgtagctgctggtgcaaacccaatggacttgaagagaggtattgac
aaagctgttgtagctgtagttaaaaacctacaatctcagtctcagtctgtaggagattct
tcagaaaaaatcgagcaggttgcttctatctctgcaaacaatgatgatactatcgggact
ctaatcgctgaagctttcggtaaagtaggtaaagaaggtgtaatcactgtagaagaagct
aaaggtactgatacaactgtagacgttgtagaaggtatgcagttcgacagaggataccag
tctccttacttcgtaaccaacccagagaaaatggttgcggaactagacaatccttatatc
cttttagttgagaaaaagatctcttctatgaaggaattattaccagttcttgagccagtt
gcacaaggtggtaagtctttattaattatctccgaagaagttgaaggtgaagctttagcg
acattggtagtaaacaaactaagaggttctcttaagattgctgctgttaaagctcctgga
ttcggtgacagaagaaaagctatgttggaagatatcgctatccttacaggtggacaggtg
atttctgaagagcaaggcttcactatggaaaacattactttagatatgttaggaactgcc
gagaaagtttctatcgacaaagacaacacaactatcgtaaacggtggtggtgaagaagct
aaaatcaaaggaagagtagcacagatcaaagctcagatggaaactacaacttctgactac
gacagagaaaaacttcaggaaagactggctaagttagctggtggtgttgctgtactttat
gtaggtgctgcttctgaagttgaaatgaaggagaaaaaagacagagtagacgatgcgctt
cacgcaaccagagctgctgtagaagaaggtattgttgctggtggtggtgttgctttagtt
agagcgatctcttctttagacaaccttactggtgctaacgctgacgaaactacaggtatc
aaaatcgtaaaaagagcgatcgaggagccattgagacaaatcgttgctaacgcaggtggt
gaaggttctgtaatcgttgctaaagtagcagaaggtacaggtgacttcggatacaacgct
aaaactgacgagtatgtaaacatgttggaagcaggtattatcgaccctactaaagtaaca
agagttgctcttgaaaatgcagcttctgtatcaggtatgcttcttacaactgagtgtgta
atcactgaggtgaagaaagatgaaccagctatgccaatgggtggtggtatgccaggaatg
atgtaa
DBGET
integrated database retrieval system
