Elizabethkingia ursingii: BBD34_16300
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Entry
BBD34_16300 CDS
T05036
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ego
Elizabethkingia ursingii
Pathway
ego03420
Nucleotide excision repair
ego03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBD34_16300
03430 Mismatch repair
BBD34_16300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ego03400
]
BBD34_16300
Enzymes [BR:
ego01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBD34_16300
DNA repair and recombination proteins [BR:
ego03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBD34_16300
MMR (mismatch excision repair)
Other MMR factors
BBD34_16300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AQX10095
UniProt:
A0AAJ3NDB6
LinkDB
All DBs
Position
3583640..3585958
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AA seq
772 aa
AA seq
DB search
MDYLKGLNESQYEAVTTIQGPLMVLAGAGSGKTRVLTMRIAHLIQNGVDPFNILALTFTN
KAAREMKERIARVVGDSDAKSIWMGTFHSIFARILRMEAHYLGFPSNFTIYDSQDALNVI
KKVLKEMSIDSDLYKPKKVLSRISQYKNNLITVNAYFNNPELMEADEMANMKLLGEIYRK
YVETCYKSGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKAL
ASKFENLCVVGDDAQSIYAFRGANIYNILNFKKDYPDAITVSLEQNYRSTQNIVNAANDV
IAKNQQQFKKNVFSENEPGDKIQVYRSLSDADEANFVAAQILENSMRNQRKYSDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEIKDLIAYLRLLVNENDQEALLRIINYPT
RGIGETTQNKLIVTADQLNISMAELLNNLQMYGPQTGFNAGTLNKLSEFWNMIKAFQVMM
KTETVYQVAMDVAQKSGLLKLLKDDQTPEGVSRMENIQELMNSLQGFIEEQQQLEDGDPG
LSNFLENIALSTDTQDKDDDNNKVSLMTIHLSKGLEFPVVHIVGLEENLFPSFMSANTRE
ELEEERRLFYVALTRAEKQAIFSYAVSRFQWGKITDSEPSRFLSEVDTMYLDFLNPATDT
RFRNSSGLTSSLFDDAPPPRLVKKDTPKKLTPSPALTPKNLKPVASAQINNPSGGTTDHI
EVGDMVRHDRFGVGEVVFLDGTDPQNIKAKVLFQHEGEKNLILKFAKLTKIS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaaaggacttaatgaatcacagtatgaagcggtaacaactatccaggga
cctttgatggtactggcgggagcgggttccggcaaaacccgggtactgacaatgcgtatt
gcccatctgatacaaaatggtgtagatcctttcaatattctggcactaacctttaccaac
aaagcagcacgtgaaatgaaagagcgtattgcaagggtagtaggggatagcgatgctaaa
agtatatggatgggaacatttcactccatatttgccagaatacttcgtatggaagctcat
tatctgggatttccgtccaattttacgatttatgatagccaggatgcactgaatgttatt
aaaaaagtgctgaaagagatgtctattgattcagatttgtataaacctaaaaaagtattg
agcagaatttctcagtataaaaacaatctgattacagtaaatgcctatttcaataatccg
gaactgatggaagctgatgaaatggctaatatgaagctgctaggtgaaatataccgtaag
tatgttgaaacctgctacaaatccggagcaatggattttgatgatttgttgctacgtacc
aatgagcttctaaccagattcccggaagtattggcaaaataccaggacagattccgttac
atattggtagatgagtaccaggataccaaccattcccagtatcttattgtaaaagcattg
gcttctaaattcgagaatttgtgtgtggtaggagatgatgcacagtccatctatgcattc
cgtggtgcaaatatctacaacattctgaactttaaaaaagattatccggatgcgattact
gtttctctggaacagaattaccgttctacgcagaatattgtaaacgctgcaaatgatgtt
attgctaaaaatcagcagcagtttaagaaaaatgttttcagtgaaaatgaacccggagat
aaaatacaggtttaccggagtctctccgatgcagatgaagctaacttcgttgctgcacag
atcttggaaaacagtatgcgaaatcagcgtaaatacagtgattttgcaattctatataga
accaactctcagactcgtgcatttgaagatgcattgagaagaaagaacattccgtataaa
gtatatggtggactttcgttctaccagagaaaagaaatcaaagatttgattgcttattta
agacttctggttaatgaaaacgatcaggaagctttgcttcgtattatcaattatccaaca
agaggtattggtgaaacgacgcagaataaactaattgttactgccgatcaactgaatatt
tctatggccgaattactgaataaccttcagatgtatgggccacagacagggtttaatgca
ggtacactcaacaagctttcagaattctggaatatgatcaaagcctttcaggtgatgatg
aagacagaaaccgtttatcaggtggctatggatgttgcacagaagagcggactactaaag
ctactaaaggacgaccaaactccggaaggtgtttcccgaatggagaatattcaggaatta
atgaactccttgcaaggatttattgaagagcaacaacaattagaagacggtgatcccggc
ctttctaatttccttgaaaacattgcactttctacagatactcaggacaaagacgatgac
aacaataaagtctccttaatgaccattcacttgtcaaaaggtttggaatttccagtggta
catattgtaggtctggaagagaatcttttcccgtcgtttatgagtgctaatacccgtgaa
gaactggaagaagaaagacgtttgttttatgttgcgcttacaagagctgaaaaacaggct
atattctcgtatgcagtttcccgttttcagtggggtaaaattacagattccgaaccaagc
cgtttcttaagcgaagtagatacaatgtatctggacttccttaatccggcaactgataca
cgattcagaaattcttcaggacttacctctagtctttttgatgatgcaccacctccacgc
ctggtgaagaaggatactccgaagaagttaacgccttctccggctttaacacctaaaaat
ctgaaacctgtagcttctgctcaaattaacaatccatctggtggaactacagatcatatt
gaagtaggggatatggtacgacatgaccgttttggagtgggagaagttgtcttcctggac
ggaaccgatccgcaaaatataaaagcaaaagtactattccagcatgaaggtgagaaaaac
ctgattctgaaattcgcaaagctgacgaaaatttcctaa
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