KEGG   Elizabethkingia ursingii: BBD34_16350
Entry
BBD34_16350       CDS       T05036                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ego  Elizabethkingia ursingii
Pathway
ego03030  DNA replication
ego03410  Base excision repair
ego03420  Nucleotide excision repair
ego03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ego00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBD34_16350
   03410 Base excision repair
    BBD34_16350
   03420 Nucleotide excision repair
    BBD34_16350
   03440 Homologous recombination
    BBD34_16350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ego03032]
    BBD34_16350
   03400 DNA repair and recombination proteins [BR:ego03400]
    BBD34_16350
Enzymes [BR:ego01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BBD34_16350
DNA replication proteins [BR:ego03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BBD34_16350
DNA repair and recombination proteins [BR:ego03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BBD34_16350
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBD34_16350
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 RNase_H_2 HHH_2 HHH_5 HHH
Other DBs
NCBI-ProteinID: AQX10104
UniProt: A0AAJ3TPA6
LinkDB
Position
3594185..3597001
AA seq 938 aa
MDATQDKRLFLIDAYAMIFRGYYALIRSPRLTSKGMNTSAIFGFTNSLIELIKREKPTHL
AVVFDVGGKTLRHDDFEEYKANRSETPEAIKIAVPYIHQILEAMHIPILGVEGYEADDVI
GTLSYKAESEGYNVYMVTPDKDFAQLVTDRVKIYKPGMKGGDIEILGVEEVKAKYDIQDP
KQVIDFLAMMGDSVDNIPGLEGVGEKTAKKFLQDYGSIENLLANTADLKGKLKEKVEASA
ERGILSKKLATIMIDAPIDFHQEQYDLEAPDFEKVKEIFEELEFRRLYENMYRAFAPKGE
PVKATAEETVKKVSPQAEQLNLFSSFDELDAATSSKKDIKTNDHLYQYVDSPKALSVLVR
NLLEKPALAFDTETTSLNELEAQLIGVSFSYKKGLAYYIPMPEDKQEAQVLLDIMRPVFE
KEDQIKIAHNLKFDYKVLHQQGVEVKGKLFDTMIAHYLLSPDGRHGMDYLSEMYLDYIPV
SIETLIGKKGKKQGTLRDVSVAEQTAYAAEDADVTFQLYELFAPQLKSENLEKLFTEVEM
PLVNVLARMELAGVSLDKDWLAQESIDLESDLKKLEQEIFELSGEEFNMNSPRQLGDILF
EKMQLDPKAKKTKTGQYATSEDILQKLASKHEIIKHILEYRQLQKLKSTYVDALPTQIDA
LDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVAGEGKKLISADYSQIE
LRLIAEISGENNMLEAFNQGADIHASTAAKLFKIPIEEVSKIQRSQAKTVNFGIIYGQGA
FALAEQTGLSRSEAKAMIDAYYETYPRLREYMDEQVKKARDLGYVETILGRKRHLTDINS
NNFVVRGHAERNAVNAPIQGSAADIIKLAMIRIDQQLDEKKMNTKMLLQVHDELVFESPI
SEIEKASKLIKTEMESAYPTKVPLVVEVGVGDNWLEAH
NT seq 2817 nt   +upstreamnt  +downstreamnt
atggatgcaacacaagacaaaaggctctttcttatcgatgcctacgcaatgattttccgt
ggatattatgctttaatcagaagtccgagattaacaagcaaggggatgaatacctctgca
atctttggatttaccaattcattaatagagcttataaaaagagaaaagccaacacatctt
gctgttgtatttgatgtgggaggtaaaaccctgcgtcatgatgactttgaagaatacaaa
gccaatcgttccgaaacaccggaagctattaaaatagcagttccgtacatccatcagatt
ctggaagcgatgcatattcctattcttggagtagaaggttatgaggccgatgatgttata
ggtaccctttcttataaggccgagagtgaaggctataatgtatacatggtaacaccagat
aaggattttgcccagctggttacagaccgtgtgaagatatacaaacctggaatgaaaggt
ggagacatcgaaattctgggtgtagaagaagtaaaagcgaagtacgatattcaggatcct
aagcaggtaattgacttcctggcaatgatgggggatagtgtagataatatcccgggactg
gaaggtgttggtgaaaaaacagctaaaaagttcctgcaagattatggtagcatagaaaat
cttttggcaaatacagctgatctgaaaggaaagctgaaagaaaaagtagaagcaagtgcg
gaaagaggtatactctccaaaaaattggcgactattatgatcgatgctccaatagatttc
catcaggagcaatacgacctggaagcacctgattttgaaaaagtaaaagaaatattcgag
gaactggagttccgtagattatacgaaaatatgtaccgtgcttttgctccgaaaggagaa
ccggtaaaggcaacagctgaagagaccgtgaagaaagtttcgccacaggcagagcagctt
aatttattctcaagttttgacgagctggatgcagcaacctcttctaaaaaagatattaaa
accaacgaccatttatatcagtatgtagattcgccaaaagcgctttcggtactggtgaga
aatcttttggaaaaacctgcattagccttcgatacagaaactacttccttgaatgagttg
gaagcgcagctaattggtgtttctttctcttataaaaaaggcttggcttattatattccg
atgccggaagataagcaagaagcgcaagttcttttggatattatgcgtccggttttcgag
aaagaagaccagataaagatagcccataatctaaagttcgactataaagtacttcaccag
caaggtgttgaggtaaaggggaagctttttgatacaatgatagctcattacctgctaagt
ccggacggacgtcatggtatggactatctgtccgaaatgtatctggattatataccggtt
tctattgaaactttaataggaaaaaaaggtaaaaagcaaggcacattaagagatgtgagc
gtagctgaacaaacagcttatgcagcagaagatgctgatgttactttccagttatatgag
ttgtttgccccgcagttgaaatctgaaaatctggagaaactttttaccgaggtggaaatg
ccgttggtaaatgttttggcacgtatggagcttgccggagtttctttggataaagattgg
ctggcgcaggaaagcatagatttggaaagcgaccttaagaaattggagcaggaaatattt
gaactttccggtgaagagtttaatatgaactctccgcgtcagttaggagatattttgttt
gagaagatgcagcttgatccaaaggcaaagaaaaccaaaaccggacaatatgcaacttct
gaagatatcctgcaaaaactggcttctaagcacgaaatcattaaacatatattggaatac
cgtcagttgcaaaagctgaaatctacctatgtagatgctttacctacacagattgatgcc
cttgacaacagagtacataccaatttttcgcagactactgctgctaccggacgtttagca
agcgttaatcctaacctacagaatattccgatccgtacacttcgtggccagcaaattcgt
ggtgctttcgttgccggagaagggaaaaagctgatctctgccgattactctcagatagag
ttgagactaattgctgagataagtggagagaataacatgctggaagcttttaatcaggga
gcggatattcatgcttctacggcggctaagctatttaaaatcccgattgaagaagtatct
aaaatacaaagaagccaggcaaagactgtaaactttggtattatatatggtcagggagct
tttgcattggcagagcaaaccggactttcccgttcagaagcaaaagcgatgatcgatgct
tactatgagacttatccgagacttcgtgagtatatggacgagcaggtgaagaaagcacgt
gatctaggttatgtagaaactattctaggtagaaaacgacaccttaccgatatcaattcc
aataattttgttgtacgtggtcatgcagagcgtaatgctgtaaatgcaccaatacaggga
agtgcggctgatattataaaactggcaatgatcagaatcgatcaacagttggatgaaaag
aaaatgaataccaaaatgcttcttcaggtacatgacgaattggtgtttgaatctccgata
agtgagattgaaaaagcatcaaagcttatcaaaaccgaaatggaaagcgcatatcctaca
aaagtgccgttggtggtagaagtaggagtgggagataactggctggaagcacactaa

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