Elizabethkingia ursingii: BBD34_17335
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Entry
BBD34_17335 CDS
T05036
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ego
Elizabethkingia ursingii
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ego03400
]
BBD34_17335
Enzymes [BR:
ego01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BBD34_17335
DNA repair and recombination proteins [BR:
ego03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BBD34_17335
Prokaryotic type
BBD34_17335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AQX10287
UniProt:
A0AAJ3NA38
LinkDB
All DBs
Position
complement(3813397..3814701)
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AA seq
434 aa
AA seq
DB search
MENKVVIYWFRRDLRTEDNKGLQQALTSGLPVVPIFIFDTELLNQLSDPYDRRVDYIHQA
LISINETLHQYQSTLQVYHGKPLEVFKKIITQYQIQAVYCNRDYEPQAIKRDQIVQTFLE
QHAIHFYDFKDQVIFDQSEIVKADGLPYTVYTPYAKKWRTEIKPEHYTTAKTDLSNFYKT
APQEILSLSDIGFKKTDMLFRKPEPDFEIIKDYTLYRDFPALDKTSHLGIALRFGTISIR
ECVSFALRHNDTWLSELIWREFFMQILYHFPKVVHHSFKAQYDYIEWRNNEEEFQLWCKG
ETGYPIVDAGIRQLNSTGFMHNRVRMIVASFLCKHLLIDWRWGEAYFAEKLLDYDLSANN
GNWQWAAGSGCDAAPYFRIFNPTAQTQKFDKDLLYIKKWNPDFQQDIMPPIVQHEEARQR
ALQVYKKAIENFNK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaagttgttatatactggttccgaagagatctgagaaccgaagataataag
ggattacaacaagctttaacttccggtttaccagtagtacctatatttatttttgacaca
gagcttctcaatcagttaagcgatccctatgatcgtcgtgtagattatatccatcaggca
ctaatatcaattaacgaaactcttcatcaatatcagtcaactcttcaggtttaccatgga
aagcctttagaagtttttaaaaagattataacacaatatcagatacaagctgtatactgc
aatcgggattatgagcctcaggcaataaaaagagatcagatagtacaaacatttttagaa
caacatgctatacacttttacgattttaaagatcaggttattttcgatcagtccgaaatt
gtaaaagcagatggactcccctacactgtttacacaccttatgctaaaaaatggcgaact
gaaattaagcctgagcattatacaacagcaaaaacagatttaagcaatttttataaaact
gccccacaggaaattctgtctttatcagacattggtttcaaaaaaacagacatgctattc
cggaagccggaaccagattttgaaattataaaagattatactttatatagagattttccg
gctttagataaaacttcccatctgggaatagcacttcgttttggcactatttccataaga
gaatgtgtttcctttgcccttaggcataacgatacatggctctcggagcttatctggaga
gagtttttcatgcagattctttatcactttcctaaagttgttcaccacagttttaaagca
caatatgattatattgaatggcgtaataatgaggaagaattccagctttggtgcaaaggt
gagactggttatccgatagtagacgccggtattcgacagctcaactctacaggctttatg
cacaaccgtgtacgaatgattgttgcgagctttctatgtaagcacctgcttattgactgg
cgttggggtgaggcttattttgcggaaaaacttctcgattatgatttgtccgccaataat
ggcaactggcaatgggcagcaggctctggctgcgatgcagctccttatttcaggattttt
aatccgacagctcaaacacagaaatttgataaagatttactatatattaaaaaatggaat
cctgattttcaacaagatataatgcctcctatagtacaacatgaagaggcaagacaacgt
gcactgcaggtttataaaaaagctatagaaaactttaataaataa
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