Eucalyptus grandis (rose gum): 104414097
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Entry
104414097 CDS
T03547
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104414097
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104414097
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
Motif
Other DBs
NCBI-GeneID:
104414097
NCBI-ProteinID:
XP_010023418
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Position
8:complement(32311350..32318989)
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AA seq
676 aa
AA seq
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MEEMGFRPWQKGSLHGWLTAAVRLLFLLLACSVVATVREVRGNEYPGVQLKVQNNQVVTD
NGIVEITFSNPDGMVTGIKFNGIDNLLEARNKEADRGYWDIVWNRPEEASMFTRIEGTTF
KVVASTDDLVELSFVSSWSNSSESYLAPLIIDKRFVVRRGSSGFYGYAIFNHPKGWPDLD
IGEARIAFKLNGQKFRYMAISDERQRVMPTDEDRASGRVLDYKEAVLLTGPSNSELEGEV
DDKYQYSCENQENKVHGWISSDPPVGFWMITPSDESHTAGPVKQDLTSHIGPTTLNVFYS
NHYAGKDVSMSFRNGEAWKKVYGPFMVYVNSVSPEEDQSKLWADAKGQMLMETASWPYDF
ISSDDYPSAAGRGTVSGQLLVRDRYMENRDMAAGSAYVGLAAPGEVGSWQTNTKGYQFWT
RADENGSFEIKNVRPGIYGLYAWVPGFIGDYKYHLNVMVKPGSEIQVDPLVFSPPRSGPT
LWEIGIPDRTAAEFYVPLPNPRFMNNLSKNGIGERFRQYGLWDRYSELYPKNDLVYTVGV
DNYHRDWFFAHVTRKTGNSTYVPTTWRIDFHLQNVNFRGTYRLQMAVASATLSRISIGVN
NLSQQPPSSTGRFGNDNAIARHGIHGLYWTFGFDVPGSRLRRGTNSIYLAQSSSARTPFE
GVMYDYIRFEGPPRMN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatgggtttccggccgtggcagaagggttcgctccatgggtggttgaccgcg
gcagttcgcttgcttttcttgctcttggcttgctccgtggtggcgacagtaagagaagtt
cgagggaacgaatatcctggggtccagctgaaagtgcaaaataatcaggtggtgacggac
aatgggattgtcgagatcacgttctcaaatccagatgggatggttacgggcataaagttc
aacgggattgataacctccttgaggctcgcaataaagaagccgatagagggtactgggac
attgtgtggaaccggccagaggaagctagcatgtttacaaggattgaaggaacaacgttc
aaggtggtagcaagcaccgacgacctagtggagttgtcgtttgtaagcagctggagcaat
tcttccgagtcgtacttggcgccactcatcatcgacaagagatttgtggtgagacgtggg
agttcagggttctacgggtacgcgatattcaaccacccgaagggatggcccgacttggac
atcggagaagcccggattgctttcaagctcaacggacaaaagtttcgttatatggctata
tcggatgagaggcaaagggttatgccaacggacgaagatcgcgccagtggtcgtgtgcta
gactacaaggaagctgtacttttgactggtccatccaattccgagctagaaggcgaggtg
gatgataagtaccaatactcgtgcgagaaccaggagaacaaggtgcacggctggatcagc
agcgatccgccggtgggattctggatgatcacccccagcgacgagtctcacaccgccggg
cctgtcaagcaagacctcacttcccacattggcccgaccacgctcaacgtgttctatagc
aatcactatgcggggaaagatgtgtccatgagtttccggaacggagaggcgtggaagaag
gtttacggaccattcatggtctacgtcaactcggtgtcgcctgaagaagaccaatcgaag
ctttgggcggacgcaaaaggacagatgttgatggaaactgccagttggccctacgacttc
atcagctcagatgattatccttccgcagccggacgaggaaccgtcagcggtcaactgttg
gtccgggacagatacatggagaatagagacatggcggcgggctccgcatacgtagggttg
gcagcaccgggagaggtcggttcgtggcaaaccaacacaaagggttatcagttttggact
cgagcggacgaaaacggatctttcgagattaaaaatgtccggccaggcatttatggcttg
tatgcatgggttcccggtttcatcggggactacaaataccacttgaacgtcatggtcaag
ccagggtctgaaatacaagtggatcctctggttttcagccctccacgatctggtcccacg
ttgtgggaaattggcatccccgatcgaacggcagccgaattctacgtgcccttacctaat
ccgcggtttatgaacaatctgtccaaaaacggcatcggagagaggttccggcaatatgga
ttatgggaccggtactcagaattataccctaaaaacgatctcgtctacactgtcggcgtc
gacaactaccatagagattggtttttcgctcatgtcacccggaaaacaggaaattcaaca
tacgtgccaacaacatggaggattgactttcatcttcaaaatgtgaacttcagagggacc
tacagacttcaaatggcagtggcatcagccaccctgtctcgcatatcgatcggggtcaac
aatctgagccagcaacctccctcatcgacgggccgtttcggcaacgacaacgccatcgcg
aggcatggaatccacggtctgtactggacgtttggcttcgacgtgccgggctctcgccta
cgcagggggaccaactccatctacctcgctcagtcttcgtcagccaggacacccttcgaa
ggcgtcatgtacgactacattcgattcgaaggccctccgagaatgaattga
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