Eucalyptus grandis (rose gum): 104414231
Help
Entry
104414231 CDS
T03547
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104414231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104414231
Spliceosome [BR:
egr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104414231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF4200
Motif
Other DBs
NCBI-GeneID:
104414231
NCBI-ProteinID:
XP_010023579
UniProt:
A0A059B0Y5
LinkDB
All DBs
Position
8:34967996..34974475
Genome browser
AA seq
485 aa
AA seq
DB search
MAALADSFLADLDELSDNEADIIEEDENDAANMEEDVDGELADIEALNYEDLDNVSKLQK
SQRYKDIMQKVEDALHKGSDISNQGMVLEDDPEYQLIVDCNALSVDIENEIMIIHNFIRG
KYHVKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKP
LPEEDLNKTIDACDRALALDTAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SSLAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEVFQTTPPSLRMRACRLLAAK
STLAARVDATRGDPSGNTGRAFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGNGKLRVSIGQSKLAA
KVAKKFKEKQFGSSGATSGLTSSLAFTPVQGIELSNPQAHANQLASGTQSTYFSETGTFS
KIKRI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctggctgattctttcctcgcagacctggacgagttatctgacaatgaggct
gatataattgaagaagatgaaaatgatgctgcaaacatggaagaagatgttgatggggaa
ctagctgacatagaggccctcaattatgaagatcttgataatgtttccaaattacagaag
tcacagagatacaaggatataatgcagaaagtggaagatgctcttcataaaggttctgat
atctcaaatcaggggatggtgttggaagatgatccggaatatcagctcattgtggactgt
aatgccctctcggtcgacattgagaatgaaataatgattatccacaattttattcgtggc
aagtaccatgtgaaatttccagagcttgaatcgcttgtccatcatccaatagattatgct
agggtggttaagaaaattggaaatgaggtggatttgacccttgttgatttggaaggactt
ctaccttcagctgttatcatggttgtctcagttacagcatcaactacgagtggcaagcca
cttccggaagaggaccttaataagacaattgatgcatgtgatcgagctcttgctctcgat
acagcaaaaaagaaggttcttgattttgtagaaagtagaatgggatacattgcaccaaat
ctttctgccattgtcgggagcgcggttgctgcaaagctgatgggaactgctggtgggctc
tcatccttggctaagatgccggcttgtaatgtccagcttcttggtgccaagaagaaaact
ttagctggtttttcaactgcaacatctcagtttcgcgtaggttacattgagcaaacagag
gtattccagactactccaccttctctaagaatgcgtgcttgccgacttttggctgcaaag
tcaactctcgctgcacgtgtagatgctactaggggagatccatcaggaaatacagggagg
gcatttagagaggagattcgaaagaaaattgaaaaatggcaggagccccctcctgcaaag
cagccaaaaccacttccagttcctgactctgagcccaagaagaaaagaggtggtcgtcgg
ctaaggaagatgaaggagaggtatgcaataacggatatgagaaaactggccaacagaatg
caatttggtatacctgaagagagttctttaggtgatggactgggggaaggctatggaatg
cttggtcaggcagggaatggaaagctgcgagtgtctattggtcagagtaaacttgctgca
aaagttgccaaaaagttcaaggaaaaacaatttggaagcagtggtgccacctctggcctt
acgtcaagtctggcatttacgcccgtgcaggggatcgagctttcaaatccacaggctcac
gcaaaccagcttgccagtggaactcaaagtacatacttctccgagacgggaacgttttca
aagataaagaggatttga
DBGET
integrated database retrieval system
