Eucalyptus grandis (rose gum): 104414378
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Entry
104414378 CDS
T03547
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104414378
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
90S particles
Other 90S particles
104414378
Pre-60S particles
Other pre-60S particles
104414378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
ANAPC4_WD40
WD40_RFWD3
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
104414378
NCBI-ProteinID:
XP_010023757
UniProt:
A0A059B2K0
LinkDB
All DBs
Position
8:39088425..39095548
Genome browser
AA seq
498 aa
AA seq
DB search
MIAAISWVPRGASKAVPEVAEPPSKEEIEEILKSGVVERSGDSDGEEDDENMDAVASEKA
DEVSTALSAADALGRISKVTKAGSGFEDIADGLRELDMDNYDEEDEDVKLFSTGLGDLYY
PSNDMDPYLKDKDDDDDTEEIEDLSIKPMDSLIVCARTDDEVNLLEVYLLEPSLSDESNM
YVHHEVVISEFPLCTAWLDCPIKGGDKGNFIAVGSMEPAIEIWDLDIIDAVEPCLVLGGQ
EELKKKKKKGKKASIKYKEGSHTDSVLGLAWNKEFRNILASASADRQVKIWDVAAGKCNI
TMEHHTDKVQAVAWNHHAPQVLLSGSFDHSVVMKDGRIPSHSGYRWSVTADVESLAWDPH
SEHFFVVSLEDGTVRGFDVRAAISNSASQSLPSFTLHAHEKAVSTISYNPAAPNLLATGS
TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVSFSEDSPLLLAIGGSKGRLEVWDTSSDAA
VSRRFGKHGKPKTAEPGS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggcgatatcctgggtccctagaggggcttcgaaggcggtccccgaggtggcc
gaaccgccttccaaggaggaaattgaagagattttgaagagtggagttgtggaaagaagt
ggagatagtgatggtgaggaggatgatgaaaacatggatgcagttgcttcagaaaaggct
gatgaagtttccactgcattatctgccgctgatgcactcgggagaatttccaaggtgaca
aaagctggatctggttttgaggatatagctgatggtttgagggagcttgatatggataat
tacgatgaagaagatgaagatgtcaagctatttagcactggacttggtgacttgtactac
ccaagtaatgacatggatccctacctcaaggataaggatgatgatgatgacactgaagag
attgaggacctgtctattaaaccaatggactctctcattgtttgtgcacgtacagatgat
gaagtcaatcttcttgaggtctatttattggagccatcattatctgatgaatcaaatatg
tatgttcaccatgaagtagttatttcagaatttcccctctgcacagcatggcttgactgt
ccaattaaaggtggcgacaaaggaaattttattgccgttggctcaatggagcctgccatt
gagatttgggatcttgatattattgatgctgtagaaccatgtcttgtattaggcggtcaa
gaagagttgaagaagaaaaagaagaaaggaaagaaggcatcgattaagtacaaggagggt
agtcacacggattcagtgcttggccttgcttggaacaaggagttcaggaatatacttgcc
agtgcaagtgctgacaggcaagtcaaaatttgggatgttgcagctggaaaatgcaatatt
accatggaacaccacaccgacaaggttcaagcagttgcatggaatcatcatgctccacaa
gttcttcttagtggatcttttgatcattcggtagtcatgaaggatggaagaataccttca
cattctggatatagatggtctgtgacggcagatgtcgaaagcttggcgtgggatccacat
tctgaacacttctttgtggtgtcccttgaagatggcaccgttagaggatttgatgtacga
gccgctatatctaattctgcctcccagtcactgccaagttttactcttcatgcgcatgaa
aaagctgtcagcacaatctcatacaatcctgcagcaccgaatcttctcgcaacagggtcg
acagataagatggttaaactctgggatctgtccaataaccagccttcatgtattgcttca
agaaatccaaaagctggtgctgtcttttctgtttccttctcggaggatagtcccttatta
cttgctattggaggttcaaaggggagacttgaagtatgggatacatcatctgatgcagct
gtatcccgacgatttggaaaacatggcaagccgaaaacagcagaacctggttcttga
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