Eucalyptus grandis (rose gum): 104414388
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Entry
104414388 CDS
T03547
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104414388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104414388
03110 Chaperones and folding catalysts [BR:
egr03110
]
104414388
03029 Mitochondrial biogenesis [BR:
egr03029
]
104414388
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egr04147
]
104414388
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104414388
Messenger RNA biogenesis [BR:
egr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104414388
Chaperones and folding catalysts [BR:
egr03110
]
Heat shock proteins
HSP60 / Chaperonin
104414388
Mitochondrial biogenesis [BR:
egr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104414388
Exosome [BR:
egr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104414388
Exosomal proteins of other body fluids (saliva and urine)
104414388
Exosomal proteins of breast cancer cells
104414388
Exosomal proteins of colorectal cancer cells
104414388
Exosomal proteins of bladder cancer cells
104414388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104414388
NCBI-ProteinID:
XP_010023772
UniProt:
A0A059B1M2
LinkDB
All DBs
Position
8:39769050..39773760
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFASSLASKARIARNSAHQIGSRASWARNYAAKDIKFGVEARALMLKGVEDLADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSVEFKDRIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITLAVDAVVTNLKSRARMISTSEEIAQVGT
ISSNGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISSINAVVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKAGLQDLASLTGGELITEELGMNLEKVDLEMLGSCKKVTVSKDD
TIILDGAGDKKSIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGDYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPKDDKEGASMPPGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcttcgcttcgagccttgcttccaaagccaggattgcgaggaacagtgctcac
cagattggaagcagagcaagctgggctaggaattatgctgccaaagacatcaaatttggg
gtcgaggcgcgtgccttgatgcttaagggtgtggaagaccttgcagatgctgtgaaggtc
actatgggcccgaagggtcgtaatgtggtgattgagcaaagctttggtgctcccaaggtg
acaaaggatggtgttactgtggcaaagagcgttgagttcaaggacagaattaaaaacgtt
ggtgctagtctcgtgaagcaggttgcaaatgcaaccaatgatgtcgctggagatggcacc
acatgcgctacagtcctcacacgagcaatattcaccgagggatgcaagtcagttgcagct
gggatgaatgcaatggacttgagacgtgggatcaccctggcagttgatgcagttgtaaca
aatttaaaaagcagggcacggatgatcagcacatcagaggagattgcacaggttggaaca
atatcatctaatggtgagcgggaaattggtgaattgatcgcaaaggccatggaaaaagtt
ggcaaagagggtgttatcacaatctctgatggaaagacattatacaatgaactagaggtt
gttgagggcatgaagctggatagaggttacatttccccttatttcattaccaatcagaag
aatcagaaatgtgagttagaagatcccctcatactcatccatgagaagaaaatttctagt
ataaatgcggttgtaaaagttttagagttggcactaaagagacaaagacccttactaatt
gttgctgaggatgttgaaagtgatgccttggcaactcttatcctaaataagcttcgcgct
ggtatcaaggtttgtgctattaaggcccctggttttggagagaacaggaaagctggtcta
caggatctcgccagtcttactggtggtgaattaataactgaagagctggggatgaaccta
gagaaggtggatcttgagatgcttggatcttgcaagaaggtcacggtgtctaaagatgac
acaattatccttgatggtgctggtgacaagaagtccatagaggagagatgtgaacagatt
aggtccgcaattgagttgagcacttcagactatgataaagagaaattgcaggagagattg
gctaaactatccggtggtgtggctgtcttgaagattgggggagctagtgaagcagaagta
ggtgagaagaaggatagggttacagatgccttgaatgccactaaggcagctgtagaagag
ggtatagtaccaggtgggggtgttgctcttctttatgcatcgaaagagttggacaaattg
cagactgccaactttgatcagaagattggtgtccagattattcagaatgcattgaagaca
cctgtgcataccattgcttccaatgccggcgttgagggagctgttgttgtagggaagctc
ttggagcaggataaccctgacctaggatatgatgcagcaaaaggtgactatgttgatatg
gtgaaatctggaattatcgatccactgaaagttatcaggactgctttggttgatgctgcc
agtgtatcgtccttgttgacgacgactgaagcagttgtggttgaactccctaaggacgat
aaggagggtgcatcaatgcctcctggcatgggcggcatggactattag
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