Eucalyptus grandis (rose gum): 104414404
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Entry
104414404 CDS
T03547
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104414404
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104414404
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
Pre-60S particles
Helicases
104414404
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
104414404
NCBI-ProteinID:
XP_010023799
UniProt:
A0A059B2B3
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All DBs
Position
8:complement(40180472..40191588)
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AA seq
808 aa
AA seq
DB search
MADGAPTRAQRSSKKTKRKRSRDGPKIERLDSLPWARSLPGGGDGDGDGDGSAFSLFIGS
NELEGGFLSLEEIDESEYGLDIPKAVKQESGKAKKSKKNKDGNVRDSVDHGVEAEIASNL
EEEEEEEEQQQQENVMTERKKKKKKQKKETKKVDELPAVDDAEVDHVDDAEFYAWNDLRL
HPLIMKTIQRLGFKEPTPIQKACIPAAAHRGKDVIGAAETGSGKTLAFGLPILQRLLEER
EKSTKMREEKGEEVEKYAPKGVLRALIITPTRELALQVTDHLKEFAKDARIRVVPIVGGM
STEKQERLLEARPEIVVATPGRLWELMSGGEIHLVELHSLSFFVLDEADRMIEDGHFREL
QSIIDMLPITSSSVEERPQSMQSCVTIANIQRKKRQTFVFSATIALSADFRKKLKRGIAR
SKQSTSGGLNSIETLSERAGMREDAAIIDLTNSSILANKLEESFIECMEKDKDAHLYYIL
SLHGLGRTIVFCTSIAALRHISSILRILGIHVWTLHAQMQQRARLKAIDHFRGSEHGVLV
ATDVAARGIDIPGIRTVVHYQLPHSAEVYVHRSGRTARASSDGCSIALISSDETSKFASL
CRSFSKDSFQRFPLENSYMPEIMKRLSLARQIGEISRKDSQEKAQKSWLERNAEALQLDV
EKYDSEEERVNAHKKRKASSNKLKQLQQDLKNLLSRPLQPKTFSHRFLAGAGVSPLLQHQ
FEQIAKQKSEEGMQSSGNGKGKLVVIGQDCVEPLQALRNAGDETRVDVKETADKRKGIET
RKRERKAEKKRLHDQRRKQRKKLRGNGD
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgcgccgactcgcgcgcagaggagcagcaagaaaacgaagcggaagaga
agccgcgacgggcccaagatcgagcggctcgactcgctcccctgggctcgctccctcccc
ggcggcggcgacggcgacggcgacggcgacgggtccgccttctctcttttcatcggctcc
aacgagctcgaaggaggctttctttctctcgaagagattgatgaatctgagtacggtttg
gatataccgaaagctgtgaagcaagaatcagggaaagcaaagaaatcaaagaaaaataag
gatggtaatgtacgagacagtgtggatcatggggttgaagctgagattgcaagcaatttg
gaggaggaggaggaggaggaggagcagcagcagcaggagaatgtgatgactgaaaggaaa
aagaaaaagaagaaacaaaagaaagagaccaagaaagttgatgaattgcctgcagtggat
gatgctgaagtcgatcatgttgatgatgccgagttctatgcatggaatgatttgaggttg
catcctcttattatgaaaacaatacaaaggcttgggttcaaggaaccaacaccaatacaa
aaagcttgtattcctgctgctgctcatcgaggaaaggatgttataggcgctgcagagaca
gggtctgggaaaacacttgcttttggcttaccaattctgcagaggcttcttgaggaaaga
gaaaaatcaaccaagatgcgtgaagaaaaaggagaggaagtggaaaagtatgctccaaaa
ggtgttttacgggcccttattatcacacctaccagggaactcgcacttcaggtcactgat
catctcaaggaatttgccaaggatgcaagaattagagtagttcccattgttggtgggatg
tcaacagaaaaacaggagaggcttttagaagcaaggcctgagattgtagttgcaactcct
gggagattatgggaacttatgtcaggaggagaaatccatctcgtggagttacattccttg
tccttctttgtgttggatgaggctgatcggatgatagaagatgggcatttccgcgagttg
cagtcaattatcgacatgcttccaataactagtagttctgttgaggaaagacctcaaagc
atgcaaagttgtgtaacaatagctaacatccagaggaagaaaagacaaacttttgttttt
tctgcaactattgctctatctgctgattttcgtaagaagctgaagcggggtattgccaga
tcaaagcagtcaacaagcggtggattgaactccatagagactctttctgagcgagctgga
atgcgggaagatgctgctataattgatctgacaaattcctcaattttggcaaataagctg
gaggagtcatttattgagtgcatggaaaaagataaggatgctcacttatattatattctg
agtctacatggactaggtcgcacaattgttttctgcacatcaattgcagctttacgccac
atttcctctatcttacgcattcttggcatccatgtatggactctgcacgcgcagatgcag
caaagagctcgattgaaggcaattgatcattttcgtggaagtgaacatggtgtgcttgtt
gctactgatgttgctgctaggggtattgatattccaggcattcgaactgttgttcattat
cagcttccccattcagcagaagtttatgtccatagaagtggaaggactgccagagcttct
tctgatggatgcagcatagcactaatatcctctgacgagacatcaaaatttgcctctcta
tgtagatcattttccaaggattcttttcagcggtttcctctggagaactcatacatgcca
gagatcatgaaacgtttatctctggcgcgccaaatcggtgaaatttctcggaaagactct
caggaaaaggcccagaaaagctggttggaacgaaatgcagaggccttgcaattagatgtg
gagaaatatgacagtgaggaagagagagttaatgctcacaagaagaggaaagctagctcc
aacaaactaaagcagctgcaacaggacctcaaaaatcttctttcacgtccattgcaacca
aagacattctcacatcgcttcttggcaggggctggtgtttcacctctcctccaacatcaa
tttgaacaaatagcgaagcaaaaatcagaagaaggtatgcagtccagcggaaacggaaaa
gggaagctagtggtcattggtcaggattgtgtagagccactccaggcactccgtaatgct
ggtgatgagacacgcgttgatgtgaaggagacggcagacaaaagaaaaggcattgaaact
cggaagagagaaagaaaagcggagaaaaaacgtttacatgaccagcgaaggaagcagagg
aaaaaattgagaggaaacggtgattag
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