Eucalyptus grandis (rose gum): 104414935
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Entry
104414935 CDS
T03547
Name
(RefSeq) SAC3 family protein B
KO
K23719
nuclear mRNA export protein SAC3
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104414935
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
104414935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
DUF4734
Motif
Other DBs
NCBI-GeneID:
104414935
NCBI-ProteinID:
XP_010024454
LinkDB
All DBs
Position
8:complement(52056616..52069644)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAAPGSGFGRDMGPSGPGPGKSATPFGSFRRPSPPRASPSPPPRSTNPASPPPPPLFGAP
PVRSPSPRRPGISVGTQLLPPSFDNGYRAPARPYTSSTAFRPNESFPRLGSGPKPLYKYP
DTQISQRPSSVTSLVAARNQGSVTAGIARFQDSGRSNLPVTSPVRDNLRNSSKYTLTSHF
DAQPRSPVGYEDIYDDFRPPYGEGQRTVFPQVTRSPQSIRNKYSPVPQPTQLALPSIRNS
YSPQEIPRFEEAQRPATISTGWGNRPKSPSNYTNPVPHNDQNGFDNSRRGIPTDIIKVER
TKRTRSPPLSPMNDLQESSPLSDDNYNRSSVSLPVSSTKTGMAFSRPDSGVHQNVPSSSD
ISLEAPPNKQSGFPVPKRTRSPAPSDKDMQQNPLSSPEEIEREMQAKAKRLARFKVELSE
PAKRSSIIAEPKFSSVHHDLSMVQERKFIRETFNDVTGDFPPGSFDNGDVESSSNIVGLC
PDMCPESERGERERKGDLDQYERLDGDRNQTSKSLAVKKYTRTAEREADLIRPMPVLLKT
IDYLLSLLDQPYDNRLLGLYNFLWDRMRAVRMDLRMQHIFDVEAVKMLEQMIRLHVIAMH
ELCEFTKGEGFSEGFDAHLNIEQMNKTSAELFQLYDDHRKKGISIPTEKEFRGYYALLKL
DKHPGYRVEPAELSLDLAKMTPEIRQTPEVLFARDVARACRTGNFIAFFRLARKASYLQA
CLMHAHFAKLRSQALASLHSGLQSNQGLPVAVVARWLAMEEEDIESLLHYHGFSVREYKE
PYMVKEGPFLHGDRDFPTKCSELVHLKKSTSIIKDVLNPDSISSLSKGATKFQLSNDRKH
DMKNIQPFEKDSSNYVSDQEMAISETTRSRSIYAPDQDMAISETISSPKKFGHVNISFRS
PEVARHVEVDHKISGAGFVPWNFPVVQSSPKAAPINLFAKADHDFRNTPKLGSLSGNELT
LLPFSPTSVQQKVLPVELESNGALQSSVSLEDAMCIANEEVPHVHQENGIDEVYVNEDTY
INDEDEEVAEAKLKLILRLWKRRSARRKELHEQRQLAAADALSSLSLGPPVHWKSDQPNG
FHMFDIDQITSERRGKHRQSWSRLNVADVTAFELIKRNPNAKCLCWKIIICSQVESSDSK
LPERSFTHQSAVRWLLAKILAAGTEHPDLIFSTPCLSIWRKWVPCQSNMDLICHLSVIEH
IGSNNSSTTIEGASAALFLLAESIPLEPQKIRLHQLITSFPVSSRLPLLILVDSRAKPGS
EDATCEIINKLGLHDIDRSRVGSLSVIFLVEDKNMEYLDEFFSDRRLREGLQWLASTSPL
HSPVHCVETRELVLNHFNSFLERLEKSGSEVGPNQCIIALNEALDQALGEVAAAANTNPS
GWPCPEVSLLDEHCKERRIADFYLPSVGWSTSARIEPILSALGKCKFPLFNDDISWLRRG
CRVVNELESQRLQLEACLIRYLTQSSNVMGDALARNEVSLLLQKHARLELQDSAYYIVPD
WVMIFRRIVNWRLMILRREELSVCYVLEHVAPQTSSSENTLEEDSHAFLGYPSLDEMLEV
GCADLSHLPSSSQPQISEPMTGSPIYSTQPQISEPMTGSPIYSRNQTWDTAHVDDLPAAG
RANILHDNEPAFVDDGAYRISTLRSNNDTPVNFAKGTDGSEKLNRLLQQCDLLQNVLDEK
LSVYF
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccggatccgggttcgggcgggatatgggtccgtcgggtcccggcccgggg
aaatccgcgaccccttttggcagcttccgtcgcccttctccgccgcgagcttcgccgtcg
ccgccgccgcgttctacgaatcctgcttcgcctcctcctcctcctctttttggcgctcct
ccggtccgatctccgagtccgaggaggcctggaatttcagtgggcacacagctattgcct
ccatcttttgacaatggctatcgggcacctgctcgtccttacacatcttcaactgctttc
aggccaaatgagtcttttccaagattgggtagtgggccaaaacctttgtacaaatatcct
gatacacaaatcagtcagaggccctcctctgtcacctctttggttgctgcacgtaatcaa
ggaagtgtaactgccgggattgccagattccaagattcaggaagaagcaacttgccagta
acgtctccagtaagagacaatttgaggaactccagtaaatatactttaacaagtcatttt
gatgcacaaccacgttctcctgtaggctatgaagacatctatgatgattttcgtcctcct
tatggggaaggtcaacgtaccgtatttccacaagtaactcgttcacctcagagtatcagg
aataaatactcaccagttccacaaccaactcaattagcccttccaagtatcaggaatagt
tactcaccacaagaaattcctcgttttgaagaagctcaaaggcctgctacaatttccact
ggatggggtaatcgaccaaagtctccaagcaactacaccaaccctgttcctcataatgac
cagaatgggtttgacaattctagaagaggcattccaactgacatcataaaagttgaaaga
acaaagagaaccagatctccgcctttgtcaccaatgaatgatctgcaggagagttcgcct
ttatcggatgataactacaataggtcttcagtgtctctcccagtgtcaagtacaaaaaca
ggaatggccttcagtcgccctgattctggtgttcatcagaatgttccgtcatcttctgat
attagcttggaagctcctccgaacaagcaaagtggctttccagttcctaaaagaacgagg
tcaccagctccctcagataaagacatgcagcaaaatcccctgtcttctcctgaggaaata
gaacgggaaatgcaggccaaggctaagcgtttagctcgattcaaagttgaattaagtgaa
cctgcgaagcgcagctccatcattgcagaaccaaaattttcttctgtgcatcatgattta
tctatggtgcaggaaagaaagttcatcagggagacttttaatgatgtgacgggagatttt
ccacctggcagttttgacaatggagatgtggaatcctccagtaacattgtgggcttatgt
cctgatatgtgccctgaatcggaaaggggcgagcgagaaagaaagggggatcttgatcag
tatgaacgtttagatggtgatagaaatcaaacaagcaagtctcttgctgttaaaaagtat
actaggacagctgagagggaagcagatctgattaggccgatgccagtcctgctgaaaacc
attgattatctactgagtttgctagatcagccttatgacaataggcttctgggtctatac
aactttctatgggataggatgagggcagtcaggatggacctccggatgcagcatattttt
gacgttgaggctgtaaaaatgctggaacaaatgatacgacttcatgttattgcaatgcac
gaattatgtgaatttactaaaggagagggcttttcagagggatttgatgcgcaccttaac
atagaacagatgaacaaaacatcggcagaattgttccaactgtatgatgatcacagaaag
aaaggaatcagtataccaacagagaaagagttcagagggtattatgcattgctcaagctg
gataaacatcctggttatagagttgaaccagcagagctttcccttgaccttgctaaaatg
actccagaaataaggcaaacgccagaagtgttatttgcccgtgatgtagcaagagcatgc
aggacgggcaattttattgcgttctttcgacttgcaagaaaagctagttatcttcaagct
tgcctgatgcatgctcattttgcaaagttacgatctcaagcacttgcttcgctacacagt
ggcctgcagagtaatcaaggtctccctgttgctgttgttgctcggtggctggcaatggag
gaagaagacatagaaagccttttgcattaccatggtttttctgtgagggaatataaagag
ccatacatggtgaaggaaggtccgttcctccatggtgatagggacttccctacgaagtgt
tcagagcttgttcatctcaagaagtcgaccagcataattaaggatgtcttgaatcctgat
tcaatttcctcactttccaagggagcaacaaagttccagttgtcaaatgatcgcaaacat
gatatgaagaatatccaaccttttgagaaggatagttccaactatgtatctgatcaagaa
atggctatttctgaaactacacgatcccgttctatctatgcacctgatcaagatatggct
atctctgaaactatatcatctccgaaaaaatttggtcatgtgaacatatctttccgatcc
ccagaagttgctcggcacgtggaagttgatcataaaatatctggggcgggttttgtgcca
tggaactttccagtggttcagagctcacctaaagctgcaccgattaatttgtttgcaaaa
gcagaccatgatttcagaaatactcccaagctaggcagtctttctggaaatgaacttacg
ctcttgcctttttcacctacttcggtccagcaaaaggtgcttccggttgaattggaaagt
aatggtgctttgcaaagctcagtatctctggaggatgccatgtgtattgcaaatgaagaa
gttccacatgttcatcaagaaaatggaattgacgaggtctatgtaaacgaggatacttat
attaatgatgaggatgaagaagttgccgaggcaaaactcaagttgatcttaaggttatgg
aagcgccgttctgccagaagaaaggagttacatgagcaaaggcaactagcagccgctgat
gcattaagttcactgtctttgggacctccggttcattggaaaagtgatcaaccaaatggt
ttccacatgtttgacattgaccaaatcacaagtgagagacgtggaaagcacagacaatca
tggtctaggctgaatgttgcagacgtgactgcttttgaactcatcaagcgcaacccaaat
gctaaatgcctgtgctggaaaattataatttgttcacaggtagaaagttcagatagtaag
ttaccagagagaagtttcacccatcaaagtgcagtcaggtggttgcttgccaagattctg
gcagctggaactgagcatcccgatctgatcttttccactccgtgtctgtcaatatggaga
aaatgggtcccttgtcagtctaatatggacttaatctgccacttgtctgtgattgagcat
ataggttcaaataattcaagcacgacaatagaaggtgcaagtgctgctctcttcctcttg
gctgaaagcatccctttggagcctcaaaagatacgacttcatcaactcataacatcattc
cctgtcagctccagattgccacttctgatcttagttgactcacgggcaaaaccgggatca
gaagatgcaacttgtgaaatcattaacaagttgggcctccatgatatcgaccgatcaagg
gtgggtagcctttcggtcatcttccttgtagaagataagaatatggagtacttggatgaa
tttttcagtgaccggcgactgagggaagggctgcagtggctggcaagcacgtcgccactt
cattctcctgttcattgtgtagaaacacgcgagcttgttcttaatcatttcaactctttc
ttggaaaggcttgaaaagagcggctctgaagtgggtcccaaccaatgtatcatagcactc
aatgaagccttggatcaggcactgggggaagttgccgctgctgccaatacaaatccctct
ggttggccttgccctgaggtttctttgctggatgagcattgtaaagaacgcagaattgca
gatttttacttgccgagtgttgggtggagtacctcagctagaattgagccaattttgtcc
gctctaggaaaatgtaagttcccacttttcaatgatgacatttcgtggttgagaagaggt
tgtagagtagtaaatgagctcgagagtcagagactacaactagaagcatgcttgatcaga
taccttacccagtcaagtaatgtgatgggggatgcactagccagaaacgaggtatcttta
ttgctacagaaacatgctcggctcgagcttcaggactcagcatactacatagtaccagat
tgggtgatgattttccggaggatagtcaattggcggttgatgattctgcggagagaggag
ctctcagtctgttatgttctagaacatgttgctcctcaaacttcaagttctgagaacaca
ttagaagaagattcacatgctttcttggggtatccatccctagatgaaatgcttgaagtt
ggctgcgccgatctgtctcatctcccatcgagttctcagccacaaatttcggagcctatg
actggatcacccatctacagtactcagccacaaatttcagagcctatgactggatcaccc
atctacagtagaaaccaaacttgggacactgcacatgtcgacgaccttccagcagcaggt
agagcaaatattcttcatgataatgaaccagcttttgtagatgacggtgcatataggatc
agtacattgagaagtaacaacgatacaccagtgaattttgccaagggcactgatggaagc
gaaaaactgaataggctattgcagcagtgtgatttactccagaacgtactagatgaaaag
ctatcggtgtatttctga
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integrated database retrieval system