Eucalyptus grandis (rose gum): 104415218
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Entry
104415218 CDS
T03547
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104415218
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
egr01002
]
104415218
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104415218
04121 Ubiquitin system [BR:
egr04121
]
104415218
Enzymes [BR:
egr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104415218
Peptidases and inhibitors [BR:
egr01002
]
Metallo peptidases
Family M67
104415218
Membrane trafficking [BR:
egr04131
]
Endosome - Lysosome transport
Others
Others
104415218
Ubiquitin system [BR:
egr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
104415218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
104415218
NCBI-ProteinID:
XP_010024771
UniProt:
A0A059B4W2
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Position
8:complement(57015858..57022438)
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AA seq
520 aa
AA seq
DB search
MKINVNSIARRVEVDNRIPLHYYYRIADNLLKQASVYREENNIVDLYIILLRFSSLVSET
IPFHRDYQLLRPKERSIYRKKLFDVVAELESLKPEFQRRVDELNEADAGLQKSQMLDFGN
SERTAYASRTLPLEWTSTSRSSYSGTDKKVKEGFSDTDSLASSSLWKYQNDQTQSSSLNT
MRVDKQFQKLSVSLPVPKKETLSRHSILGPNGLQGQWLGPSAEIKVQYPCSADFNPAEEL
SLNHAGQYDHMAVKDNDRGSPRSTMDSVLSLDDGTWSRPAEQSRPALATEVMEDPFQFVS
IKQPAPPPVLAQVRQGVAPIPPSQVADPRPGPAKSLQHSESSYQNLHVPVNMMQDFLRLA
KKNTAKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPL
GWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTSSPHGIFHLSDPGGVNVIR
NCQERGFHPHEEPSDGSPIYEHCSHVYMNSKLKFEVVDLR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaacgtcaactcgatcgctcggagggtcgaggtcgacaatcgcattcccctc
cattactactaccggatcgccgacaacctcctcaagcaggcaagtgtgtaccgggaggag
aataatattgtggatttgtatatcatccttctgaggttttcaagtttggtgtctgaaact
ataccgtttcatcgagattaccagcttttgcgtcctaaagaaaggtcgatttatagaaag
aaattgtttgatgtcgtagccgagcttgaatccttgaaaccagaattccagcgtcgagtg
gatgagttaaatgaagctgatgcagggttgcaaaagtcgcaaatgcttgattttggcaat
tcagagagaactgcatatgcctctaggacacttccactggaatggacctccaccagtagg
agttcttactcaggcacagataagaaggttaaagaaggcttttctgatactgatagcttg
gcatcttcttctctttggaaatatcaaaatgaccaaactcagagttcatcattgaatacc
atgcgagttgacaagcagttccagaagctttctgttagtcttccagttcccaaaaaggaa
acattgtctagacactctatattaggcccaaatggccttcagggccagtggctaggaccc
agtgcagagataaaggtccaatatccatgcagtgcagacttcaaccctgcagaagagttg
agcctcaatcatgctggtcaatacgatcatatggcagtcaaagataatgatcgagggtca
cctagatctacaatggattcagtgctctccttggatgatggtacatggtcacgtcctgct
gaacagtctaggcctgcattagctacagaagtaatggaagatcctttccagtttgtcagt
atcaagcaacctgctccaccacctgttcttgctcaggttcggcagggcgttgctcctatc
cccccatctcaagttgcagatccaagacctggacctgcaaaatctttgcagcatagtgaa
agctcttatcaaaatctgcatgtgcctgtaaatatgatgcaagactttttgcgattggct
aaaaaaaatactgcaaagaacttggaaacttgtggggttcttgcaggttcactgaaaaac
agggttttccatattactacgctcattattccaaagcaagagtccacttcagattcgtgt
cagacgttgaatgaagaagaaatatttgaagttcaggacagattatcactcttccctctt
ggatggattcatacacatccatctcagacctgcttcatgtcatcagtggatctccacaca
cattattcatatcagattatgttgcctgaggcaattgcgattgtaatggcacctacagac
acgtccagtccacatgggatattccatctttctgacccgggaggtgtcaatgtgattcgc
aattgccaagaacgcgggtttcacccacatgaggagccttcggatggtagccccatttat
gaacactgttcgcatgtctatatgaactctaagttgaagtttgaagtggttgatctccgg
tga
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