Eucalyptus grandis (rose gum): 104415229
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Entry
104415229 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104415229
Transcription machinery [BR:
egr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104415229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
Motif
Other DBs
NCBI-GeneID:
104415229
NCBI-ProteinID:
XP_039162847
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Position
1:complement(48066626..48071648)
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AA seq
514 aa
AA seq
DB search
MGVVTISSSASRTPLGFNAKFSTSRSATKRPLIIAFRADKNNKTALLTHHEQTYYPVETN
KEQQKKQKNARKPSRKAVCTDEISPSTLEVDYNDAAAKLENIYKLTPAAETCYGANVDHG
VRRRRRRTKKTKDVDKGEESKTSKRVVRTRKRNTKRLSLDGRITIKRRKEEQATYSVQRK
REVLSEEEKIEKLVRDYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKE
NLRSDLDREPIEAEMAEATNMSVAQLRRQLEVGHAARSKLIKHNLRLVLFVMNKYFQDFA
NGPKFQDLCQAGVKGLITAIDRFEPXRRFRLSTYSLFWIRHAIIRSMTVSSFTRVSFGLE
SVRVEIQRAKLELMFQLKRLPTEEEIIDKVGISPERYHEVMRASRPVFSLHSRHSVTQEE
FISGITDVDGVGGDSRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG
NLNISREMVRKHEVKALMKLKHPARVDYLRRYIV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactatctcaagctcagcttctcgcacaccacttggatttaatgcgaag
ttttcaactagcagatctgcaacaaaaagacccttgatcatagcattcagagcagataag
aacaataaaacagctttgctgacgcatcatgaacagacatactatcctgtagaaaccaat
aaggagcaacagaagaaacagaaaaatgcaagaaaaccatcgagaaaggctgtttgtaca
gatgaaatttctccgtctaccttggaagttgattataatgatgccgcagccaaacttgag
aatatatacaagctgacacctgcggcagaaacctgttatggtgcaaatgttgatcatggt
gtgaggagacgcagacggaggacgaagaagactaaggatgttgataagggagaagaaagt
aaaactagtaaaagagtggtccgtacccggaagagaaatacaaaacgtttgagcctggat
ggaaggatcacaataaaaaggagaaaggaagaacaagcgacctattcagttcagaggaaa
agagaggttctgagtgaagaagagaagattgagaagcttgttagggactattcagcttca
accgatttggtcagcttggactggaagaagatgaagattcctcctgttcttccttctacg
gaacatgcctggttattcaagttgatgcaaccaatgaaggctcttcttcaagtgaaggaa
aatttacgaagtgatttggatagggagccaatagaagctgaaatggctgaggcaacaaat
atgagcgtagctcaattaagaagacagctggaggttggtcatgctgccagaagcaaactt
attaagcataatcttcggcttgtcctgtttgttatgaataagtattttcaagactttgca
aatggtccgaagtttcaagatctttgccaagctggggtaaaaggacttatcacagctatt
gaccgttttgaaccanaaaggagattccggctatctacttatagcctcttctggatcagg
catgccattatacgttcaatgaccgtttctagcttcacgcgtgtctcatttggccttgag
tcggtcagagttgagatccaaagggcaaaacttgagttgatgtttcaactaaagagattg
ccaacagaggaagagataattgataaagtcggtatctcacctgagaggtaccacgaagtt
atgagggcctcaaggcccgttttctctcttcattctaggcactcggtcacacaagaagag
ttcattagtggaattactgatgttgatggagttggaggagacagtaggaggcaaccggct
cttctcaggcttgctcttgatgatgtgctcgactccttgaagcccaaggaaagtctagtc
atcagacagaggtacgggctcgatggtaaaggtgaccgaacattaggagagatcgccggg
aacttgaacatatccagggagatggtccgcaagcatgaagtgaaggcgctcatgaagctc
aagcatccggctcgagtagattatcttcgccgttacatagtctga
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