Eucalyptus grandis (rose gum): 104415478
Help
Entry
104415478 CDS
T03547
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104415478
03036 Chromosome and associated proteins [BR:
egr03036
]
104415478
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104415478
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104415478
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
104415478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
Viral_helicase1
ResIII
UvrD-helicase
PhoH
AAA_22
ATPase_2
SLFN-g3_helicase
AAA_16
DEAD
AAA
Motif
Other DBs
NCBI-GeneID:
104415478
NCBI-ProteinID:
XP_018716599
UniProt:
A0A059B7M1
LinkDB
All DBs
Position
8:complement(61776783..61781225)
Genome browser
AA seq
823 aa
AA seq
DB search
MGTIGDYNQCSSDYEPDEEGPVLISAPFPFIDEKPRHVLIGETSKCLITIQNTSSDQVEL
WGIRIFSSNPPNSFALSLMEPPSLNSDERYVRSFRQGSELEDRVLHPHQTLKIWLSCKPN
DMGLQQAIVHFDVEDARIERVVFLLAEDKISQSLAPNRSYIRVPRRKQFTMENCEFAVPY
RYGREKTQRSRSRVLQEYPIPKNFRELFMNNQVPDVLDEGLTTENYSAYFNALVIIEELN
LEKEMRRHNMECVQMTRKGARLLTLVVPGLAEKRPSLLQGDIVRVKLAYEVTAHTIPYEG
CIQRVEADEVLLRFADEFHERHYNKNFYSVQFACNRVNMRRLYQAIEAAERLGNEILFPT
VSNGRTLIETSPFVPFTSNLNEEQMRCIQMILGCKGAPPYVIFGPPGTGKTMTLVEAILQ
VYKTRSRSRVLICAASNSAADHILEKLITNEVAQVKESEIFRLNATSRPYHDLQAEHIRY
CYFVESVFRCPPLEALMRYRVIISTYTSSSLLRAEGIERGHFSHIFLDEAGQASEPECMV
PVANLCGKETVVVLAGDPKQLGPVIQSKDAEARGLGKSFLERLFEHENYLNEDIGFVTKL
VRNYRCHPAILDLPSNLFYEGKLLACKENSCSAIPSSDLLPNKEFPILFIGIQGCDEREG
NNPSWFNRIEASKVVDFIQKLRDSSSMSEADIGVITPYQQQVVKIRKVLETYDMLGVKVG
SVEQFQGQEREVIIVSTVRSTLKHTEFDRAHCLGFLSNPRRFNVAVTRARSLLVIIGNPH
IVSKDPYWEKLLQYCVDNNSYQGCPLPEGPDDEEEESFIGGET
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggaactatcggagattataaccaatgttcaagtgattatgaaccagatgaagaagga
ccggtgcttatttcggctccatttccttttatagatgagaagcctcggcatgttctcata
ggagaaacttccaaatgtttgattactatacagaataccagcagtgaccaggtggaactt
tgggggatcaggattttctcatcaaatcctccgaactcgtttgcgttgtctctgatggaa
ccgccatctctcaattcagacgaaagatatgttcgatcatttcgtcaaggttctgaattg
gaggatagagtattgcatccacatcagactctaaaaatttggttatcctgcaagccgaac
gatatgggcttgcagcaagccatcgtccattttgatgtggaggatgctaggattgaacgc
gtagtcttcttattggctgaggataagatctctcagtctctggctccaaacaggtcatac
ataagagttccaagaagaaaacaatttaccatggaaaactgtgagtttgcggttccgtac
cgttatgggagggaaaaaacccaaagatctaggtctcgtgtacttcaggagtaccccatc
ccgaagaatttcagggagttgtttatgaataaccaggtccctgatgttcttgatgaagga
ttgactactgagaactactcagcttacttcaatgcattagttatcatcgaagagctaaac
ttggagaaagaaatgaggcgccataacatggagtgtgtccaaatgacgaggaagggtgct
cgtcttctaactttggtggttcctgggcttgctgagaagaggccttcacttttacaaggc
gatattgtccgggtgaagcttgcttatgaagtcacggctcatactattccttacgagggc
tgcattcaacgtgtggaagctgatgaagtgcttttaagatttgcggatgaatttcatgag
cgtcattataacaaaaacttttacagtgttcaatttgcttgtaatcgggtaaacatgagg
cggttgtatcaggccattgaagctgcggagcggttaggaaatgaaattctgtttccaaca
gtttcaaatggcagaacgttgatcgaaacatcaccctttgtgccttttacatctaatttg
aacgaggagcaaatgcgttgcattcagatgattcttggttgcaaaggtgctcctccctat
gtgattttcgggcctccaggaaccggtaaaacaatgacattggtcgaagcgattttacag
gtatacaaaacgcggagtaggtcaagggttcttatttgtgctgcttccaacagtgctgca
gatcatatacttgaaaaactaatcacaaatgaggttgcccaagtcaaagagagtgagatt
ttcaggctcaatgctaccagtcgtccttaccacgatcttcaggcagaacacatccgctac
tgctattttgtggagtctgtcttcagatgtcctcctcttgaggctttgatgcgctatagg
gtcatcatatctacatatacgagctcatccctccttcgtgcagaaggcatagaaaggggt
cacttttcccatatttttctggatgaggccgggcaagcttcggagcctgaatgcatggtt
cctgtcgccaacctttgtgggaaggagacggtggttgtactagccggagacccaaagcaa
cttggccccgttatacagtccaaagatgcagaggctcgtggattgggaaaatctttccta
gagaggctctttgaacacgaaaactatctgaatgaggacatcgggtttgtgacaaaactg
gtgagaaactatcggtgccaccctgccattttagatcttccttcaaatctcttctatgaa
gggaaattgttagcatgtaaggaaaactcctgttctgcaatcccatcttccgatctgctt
ccaaacaaggagttccccattctatttattggcattcaaggctgtgatgagagagagggt
aataacccatcatggttcaatcgaattgaagcaagtaaagtcgttgatttcatccagaag
ttgagagacagttcgagtatgagcgaagccgacattggggtaataacaccgtatcagcag
caagtggtgaaaatcagaaaggtactcgaaacgtacgatatgttgggcgtcaaggtggga
agtgttgaacagtttcagggacaagagagagaggtcatcattgtctccactgtccgatcg
acattgaagcataccgagtttgacagagctcattgtctcggattcttaagcaacccgagg
agattcaacgttgcagtaacccgtgctcggtctctgcttgtcatcatcgggaaccctcac
attgttagcaaggacccttactgggaaaagcttttgcagtattgcgtcgacaataattcc
taccaaggctgtcctctccccgaaggaccggatgacgaggaggaggagtctttcatcggg
ggagaaacctaa
DBGET
integrated database retrieval system
