Eucalyptus grandis (rose gum): 104415535
Help
Entry
104415535 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104415535
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104415535
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104415535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
DUF4013
zf-RING_16
Prok-RING_1
zf-Nse
zinc_ribbon_16
FANCL_C
RINGv
PHD
SLX1_C
PHD_NSD
zf-RING_4
zf-RING-like
DUF983
Motif
Other DBs
NCBI-GeneID:
104415535
NCBI-ProteinID:
XP_010025162
LinkDB
All DBs
Position
8:62245786..62247354
Genome browser
AA seq
374 aa
AA seq
DB search
MPPIPPPPPPRPRRRSAAAALLFLLLPTILPPVAAQPAPTPPSDESSPAPGYGAFSNSIG
LVLVALVIVIFLLATFSAYILRCSPAPEGSIGRAVRSLRRLGAPPRGLDPAVVETFPTVA
YAAVKGHRIGERSLECAVCLNDFEDDDTLRLIPKCDHAFHPDCIGEWLASHTTCPVCRAD
LASQRADDPESPQAEPPSVEAGGSARWRRAGEEPAGGRARADPAARSMGQEGERRHHQSQ
PDTWLGSRIGRFPRSHSTGHSLVRPGDDTERFTLRLPADVRKRLMMDRPGPALPQEGCSR
RGYRYGEGSSRGRYYRRLDRLDSAPASEGWAFNRMPSFLVRMSSALSPRVAAAAAARSGG
GSFRGPAQQARPPI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgatcccgccgccgccgccgccacggccacggcggagatccgccgccgccgcc
ctcctcttcctcctccttccgaccatcctccctcccgtcgccgcccagccggcgcccacc
ccgcccagcgacgagtcctcccccgccccgggctacggcgccttcagcaactccatcggc
ctcgtcctggtcgccctcgtcatcgtcatcttcctcctcgccaccttctccgcctacatc
ctccgctgctccccggcccccgagggctccatcggccgcgccgtccgctccctccgccgc
ctcggcgccccgccccgcggcctcgaccccgccgtcgtcgagaccttcccgaccgtcgcg
tacgccgcggtgaaggggcacaggatcggcgagaggtcgctggagtgcgcggtgtgcctg
aacgacttcgaggacgacgacaccctccgcctgatccccaagtgcgaccacgcgttccac
ccggactgcatcggcgagtggctcgcctcccacaccacctgccccgtctgccgcgccgac
ctcgcctcgcagcgggccgacgacccggagagcccgcaggccgagccgccgtcggtcgag
gcgggcggctccgcccgatggcggcgcgccggagaggagcccgcgggagggagggccaga
gcggatccagccgccagatccatgggacaagaaggagagcggcggcaccaccaatcgcaa
ccggacacgtggctcggcagtaggatcggaaggtttccccgatcccactcgaccggccac
tcgctggtccgaccgggcgacgacacggagcggttcaccctgaggctgcccgccgatgtg
aggaagcgattgatgatggaccggcccgggccggccctgccccaggaaggttgctcgagg
cgaggataccggtacggcgaagggagcagccgagggcggtactacaggaggctggaccgg
ttggactcggcacccgcgtcggaaggctgggctttcaataggatgccatccttcttggtg
cgcatgtcgtcggccctctcacctagagtggccgccgctgctgccgccaggagcggtgga
gggtccttccgtggtccagcgcaacaggcccgaccgcccatttag
DBGET
integrated database retrieval system
