Eucalyptus grandis (rose gum): 104416730
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Entry
104416730 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104416730
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104416730
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
ProQ_C
Motif
Other DBs
NCBI-GeneID:
104416730
NCBI-ProteinID:
XP_039167234
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Position
1:complement(4341708..4344265)
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AA seq
405 aa
AA seq
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MAFSMSSHSTLGVASLLFTVFYIAMISSQAAIAVSAAKYNVVSXGAKPDGVTDSTQAFVG
TWLAACGSEMPATISVPAGRFLVGGATFSGPCKNNAIRWQIEGVITAPADYNVLGNVGTW
LLFQHVDGMSISGGVLDGQGAALWACKASGKSCPGGATTIVFSNSRNIAVSKLTSLNSQL
FHIVINGCQNVRLQGMKVFASGDSPNTDGVHVQLSSGVTIMNSKIGTGDDCVSVGAGTTN
LWIENVACGPGHGISIGSLGKDLEEAGVENVTVKNAVFRGTQNGLRIKSWGRLSTGFAKN
ILFQHAVMSNVNNPIVIDQNYCPNNINCPGQFSGVKISNVTYQDIHGTSATEVAVKFDCS
LKNPCAGIRLEDVKLTYKNNQQPAQASCVNAGGLAFGLVQPSSCL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcattttcaatgagtagccatagcactcttggtgtggcctcacttctcttcacggtg
ttctacattgccatgatcagctcacaagcagcaattgccgtgagcgcagccaagtacaac
gtcgtctctnncggggccaagcctgatggggtcacggactcgacacaggccttcgtgggc
acatggctcgcggcttgtggctccgagatgccagccaccatcagcgtgccggccgggcgg
ttcctggtgggaggggccaccttcagcgggccgtgcaagaacaacgccatccggtggcag
atcgaaggggtgatcacggctcccgcggattataacgtgcttgggaacgttgggacgtgg
ctcttgttccagcacgtggacggcatgtcaatctccggcggggtcctcgatgggcaaggc
gccgctttgtgggcttgcaaagcgtccggcaagagttgccccggtggagccacgacaatt
gtcttcagcaactcaaggaatattgcggtaagcaaactgacgtcgctcaatagccagttg
tttcacattgtcatcaacggatgccaaaacgtgaggttacaaggaatgaaggtttttgcg
tccggtgacagcccgaacacggatggtgtccatgtccaattgtcttccggtgtcacgatc
atgaactcaaaaattggaactggtgatgactgcgtctcggtcggtgccggcactacaaac
ctctggatcgaaaacgttgcctgtggcccgggccacggaatcagcattgggagcctaggg
aaggaccttgaagaggcaggggttgagaacgtgacggtcaagaacgctgtgttccgaggg
acacaaaacgggttgaggatcaaatcttggggcagactcagcaccggatttgccaagaac
atcctcttccaacatgccgtcatgtccaacgttaataacccaattgtcatcgaccaaaat
tactgccccaacaacatcaattgtcctggtcagttttcaggcgtaaaaattagcaacgtg
acgtaccaagacattcatgggacatcagcgaccgaagtggctgtcaaatttgactgcagt
ctgaagaacccatgcgcaggaataagattagaagatgtgaagctcacctacaagaacaat
caacaaccggctcaagcttcctgcgtcaatgctggtggattggcctttggcctggtccaa
ccctccagttgcttgtag
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