Eucalyptus grandis (rose gum): 104417983
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Entry
104417983 CDS
T03547
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104417983
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104417983
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104417983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
DUF8106
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-CCHH
DUF7685
Motif
Other DBs
NCBI-GeneID:
104417983
NCBI-ProteinID:
XP_010027480
UniProt:
A0A059AJM1
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All DBs
Position
9:complement(206715..221583)
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AA seq
459 aa
AA seq
DB search
MGESSGSKPCLDADIWAKLVPADSRYSVVDIGSNETVVYSEISCSSGNKHEWCKITRILN
QSSAMIQNKSSTAILIDGATVQSEDIMLIQSGTEIIPGPDREGHLSYRLEMIPAAERCEK
RLKISIDIENAKCGICLNIWHDVISVAPCLHNFCNGCFSEWLRRSQERHVTVLCPQCRAL
VQFAGKNHFLREVVEDILQADCSLRRSKEDVAILDSHALIQSNLVISSGRKRKRPHLAVD
EQTSGLNLSCPQCGTEYGGFRCNGDTVHIPCHACGGMMPSRSNISVPQHCLGCNRAFCGA
YWHSQGVARIDGHPLCSYDSFKPIMERSIARIPFAAHETNRYEQDITERSIRQLGRTLQD
VISEWIGKFDNREIDRSRMPLNHAETITAATHICNDCYDKLVSFLLYWFRFSMPRHLLPP
DACKREDCWYGYACRTQHHNEEHAQKRNHVCRPTRGTHP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatcctctggttcaaaaccctgtcttgacgccgatatttgggctaagcttgtt
ccagcagattcaaggtactcagttgttgacattggatcaaatgagacggttgtctactca
gagatctcatgctcttctggaaacaagcatgagtggtgcaagataactaggattttaaat
caatcttctgctatgattcagaacaagagctcaactgcgattcttattgatggagcgact
gttcaaagtgaagacattatgctcatacagtctggaactgaaattattccagggcctgat
agagaagggcatctgagctatagacttgaaatgatccctgctgcagagcggtgtgagaag
cggttaaagatctctatagacattgaaaatgcaaaatgtggcatttgcttgaacatatgg
cacgacgtcatctctgttgctccttgcctccataacttctgcaatggatgcttctccgag
tggttaaggagatctcaagaaagacatgtgacagtactctgtccccaatgtagagcactt
gtgcagtttgctgggaaaaatcactttttacgtgaggttgtggaggatatactgcaggct
gattgttctctaagacggtctaaagaagatgttgccattttagattcacacgcattgatt
cagtcaaatctggttataagcagcggaagaaaacgtaaaagacctcacttggcagtggat
gagcaaacttctggtcttaatctttcatgcccacaatgtggcactgaatatggtgggttt
cgctgcaatggggatactgtccacataccatgtcacgcatgtggaggaatgatgccttcc
agatcaaacattagcgtaccacaacattgtttgggatgcaatagagcattttgcggtgct
tattggcactctcaaggggttgcaaggattgatggtcaccctctctgctcttatgacagt
tttaaacctatcatggagcggtctattgcaagaattccatttgctgcacatgaaacaaat
cgatatgagcaagatatcacagagaggtcaattagacaactgggaagaacactccaagac
gttatctctgaatggattggaaaatttgacaatcgtgaaattgatcgatccaggatgcca
cttaatcatgctgagacaataactgctgcaacacatatatgcaacgattgctacgacaaa
ttggtatccttcctcttgtactggtttcgcttttcaatgcctagacatcttctaccacca
gatgcatgcaagagagaagattgttggtatggatatgcatgtcggacgcaacatcacaat
gaggaacatgctcagaaaagaaatcatgtttgtcgtccaacccgggggactcatccatag
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