Eucalyptus grandis (rose gum): 104418096
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Entry
104418096 CDS
T03547
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03030
DNA replication
egr03410
Base excision repair
egr03420
Nucleotide excision repair
egr03430
Mismatch repair
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104418096
03410 Base excision repair
104418096
03420 Nucleotide excision repair
104418096
03430 Mismatch repair
104418096
03440 Homologous recombination
104418096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104418096
03400 DNA repair and recombination proteins [BR:
egr03400
]
104418096
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104418096
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104418096
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104418096
MMR (mismatch excision repair)
DNA polymerase delta complex
104418096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
104418096
NCBI-ProteinID:
XP_010027623
UniProt:
A0ACC3JE16
LinkDB
All DBs
Position
9:3347920..3363250
Genome browser
AA seq
1104 aa
AA seq
DB search
MSASTRKRPPPAAHPSPAAHPPKHQATTPPPPPQPAPRPPLEEEFLDEDVYLDETLIPGD
DDHDEEYLILRDIEERQGLASRLAKWARPPLSDGYLSQSKNVVYQQLAIDYVIAESHREL
LPDRSGPAAIIRIFGVTREGHSVCCNVHGFEPYFYISCPPGMGPDDSSRFHQVLEGRMRD
ANRNSKVPKYVRRIEMVQKRSIMYYQQQTSHPFLKIVVALPTMVTTCRGILDRGIQIDGL
GMKSFMTYESNILFALRFMIDRNVVGGNWIEVPAGKYRRTAKKLSYCQLEFDCLYSELIS
HSLEGEFSKMAPFRILSFDIECAGRKGHFPEPNHDPVIQVANLVTLQGESQPFVRNVMTL
KSCSPIVGVDVMSFDTEREVLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAEALGIPE
FPILGRVRNSRVRVRDTTFSSRQHGTRESKEVTIEGRVQFDLFQAVQRDYKLSSYSLNSV
SAHFLSEQKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMAR
VTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNMKQAGSEQGTYEGATVLEAKAGFYE
KPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLSLPPECVNRTPSGETFVKSSLQKGI
LPEILEELLAARKRAKADLKEAKDPLERAVLDGRQLALKISANSVYGFTGATIGQLPCLE
ISSSVTSYGRQMIEHTKKLVEDKFTVLGGYEHNAEIIYGDTDSVMVQFGVPTVEEAMKLG
REAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTSPEKFDKMDTKGIETVRRDN
CLLVKNLVTECLHKILIDRDIPKAVQYVKNTISDLLMNRVDLSLLVITKGLTKSGDDYDV
KAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQY
YLENQISKPLLRIFEPILKNASKELLQGSHTRSISISTPSNSGIMKFAKKQLTCIGCKAL
ISNTNGTLCSHCKGREAELYCKSVSQVSELEEIFGKLWTQCQECQGSLHQDVLCTSRDCP
IFYRRKKAQKDMAEAKRQLDRWNF
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttccaccaggaaacgccctcccccggcggcgcacccttccccggcggcgcac
ccgccgaagcaccaggccaccacgccgccgccgccgccgcagccggccccgaggccgccc
ctcgaggaggaattcctcgacgaggacgtctacctcgacgaaaccctaatccccggcgac
gacgaccacgacgaggagtacctcatcctccgcgacatcgaggagcgccagggcctcgcc
tcgcgcctcgccaagtgggcccgccctcccctctccgacggctacctgtcgcagtcgaag
aacgtcgtttatcagcaattggcgatcgattacgtgatcgcggagagccacagggaactc
ttgcctgatcgttccgggcctgccgcgattattcgcattttcggggtcacgagggaaggg
catagtgtttgctgcaatgttcatgggttcgagccgtacttctacattagttgtcctcca
ggaatgggcccagatgatagttcccgttttcatcaagttctcgagggaaggatgagagat
gcaaacaggaatagcaaagtgcctaagtacgttagacgtatagaaatggtgcagaaaaga
agtattatgtattatcagcagcaaacttctcatccttttctcaagatcgtggttgcattg
ccaacgatggtgaccacatgccgtggcattcttgacagaggtattcagattgatgggttg
ggtatgaagagcttcatgacatacgaaagcaacatcctttttgcacttcgttttatgatt
gaccgcaatgttgttggaggcaattggattgaagtacctgctggaaagtaccgaaggaca
gccaaaaagttgtcttattgccagttggagttcgattgcttgtactctgaactcattagc
cattccctggaaggtgaattctctaagatggctcctttccgtattttgagttttgacatt
gagtgtgctggtcgaaaaggtcattttccagagcctaaccatgatcctgtcatccaggtg
gccaatctagtcaccttgcagggagagagccagccgtttgtgcgaaatgtgatgaccctg
aagtcatgctctcctatagttggtgttgatgtcatgtcatttgacacagaaagagaagtc
ctgctagcttggagggatttaatcagggaagtcgaccccgatattataatagggtataac
atctgcaagtttgatttgccatatcttattgagagagctgaagctttaggcattcctgaa
tttcctatattgggccgtgtgaggaatagcagggtccgtgtcagagacacaactttttcc
tcaaggcagcatggaacaagggaaagtaaagaagtcaccattgaagggagggttcaattt
gacttgttccaggctgtgcaacgagattataaactaagttcttattcgttgaactctgtt
tcggcacacttcctttctgagcagaaagaggatgttcaccattcaattatatcagatctt
caaaatggcaatgcggaaacgaggaggcggcttgctgtatattgtttgaaggatgcttat
ctcccacagcggttgctggataaactgatgttcatttacaattatgtggagatggcaagg
gtcactggcgttcctatatcttttcttctttcccgggggcagagcattaaggttctttcc
caacttcttaggaaggcaaaacagaagaaccttgttatcccaaatatgaaacaggcagga
tccgagcaaggaacatatgagggtgctacagttctggaggccaaggcaggtttctatgaa
aagccaattgcgacgttggattttgcttctctgtatccatcaataatgatggcctataat
ttgtgctattgcacactggttactcctgaggatgttcgtaagctcagcctcccaccagag
tgtgttaatagaactccgtctggtgaaacatttgtcaaatcgagtctgcaaaagggaatc
ttgccagagatccttgaagaactactggctgctcgtaaaagagcaaaggcagacctgaag
gaggcaaaggatccacttgaaagagccgtgcttgatggtcggcagctggctttgaagatt
agtgcaaattctgtatatgggtttactggagctactattggccagttaccctgcctcgag
atatcttcaagtgtcacaagctatggtcggcagatgattgagcacacaaaaaagcttgtt
gaagataaatttactgtgcttggagggtatgaacacaatgcggagattatttatggtgac
acagattcagtaatggtgcaatttggtgtacctacagtggaagaagcaatgaaattggga
agagaagccgctgattacattagtggaactttcatcaagcccatcaaactagagtttgag
aaggtctactatccatatttgttgatcagcaagaagaggtatgctggcctttattggaca
agtccagagaaatttgacaaaatggatacaaaaggcatcgaaactgtcagaagagacaat
tgcttactggtgaaaaacctggtaactgagtgtcttcataaaatacttattgacagagac
attcccaaggcagtgcagtatgtcaagaacactatttcagaccttctcatgaatcgagtg
gatttgtcccttttagttattacaaagggtttgacaaagtcaggagatgattatgatgta
aaggcagctcatgttgagctggctgaacgcatgcgcaagcgagatgctgccactgctcca
actgttggtgatagagtaccttatgtcatcatcaaagctgcaaaaggtgccaaggcttat
gaaaaatctgaggatcccatctatgtgctagaaaacaacatcccaattgaccctcaatac
tatctagaaaatcaaattagcaagccgcttcttagaatcttcgaaccaatcttgaagaat
gctagcaaggaacttcttcagggaagtcatacgagatctatttccatctctactccttca
aacagtgggatcatgaaatttgccaagaagcaactaacttgcattggttgcaaagctttg
ataagcaatacaaacggaactctttgttcacactgcaagggaagggaagctgaattgtat
tgtaaatcagtatctcaagtctcagagcttgaggagatttttggaaagctttggacacag
tgccaagaatgccagggttcacttcatcaggatgttctttgtacaagtcgggattgtccc
atattttaccggaggaagaaggcacagaaagacatggctgaagccaagcggcaattagat
agatggaacttctaa
DBGET
integrated database retrieval system
