Eucalyptus grandis (rose gum): 104418146
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Entry
104418146 CDS
T03547
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104418146
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104418146
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104418146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8_fungal
FANCL_C
Motif
Other DBs
NCBI-GeneID:
104418146
NCBI-ProteinID:
XP_010027694
LinkDB
All DBs
Position
9:4612493..4613466
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AA seq
229 aa
AA seq
DB search
MAPPSSSSSDPLFQDLYFSRRLLLHGPLHQTPNTATAPSYSRSTREEPYSPGYNSFDSNV
VMILAVLLCAVICSLGLNFIIRCALRCSSFVSSDTNGHNSSVRLANTGVKRKALKTFPIV
NYSAELKLPGLDSECIICLSEYAINDQVRILPKCHHGFHVRCIDKWLNSHSSCPTCRHCL
IETCQKIMGCGGAQASVSGPSPSSPAQAFQITIAPLEPEGPARNYHGVD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccttcttcctcatcctccgaccctctctttcaagacttgtacttctcaaga
agactgctcctacatggccctcttcaccagacaccaaacacggcaaccgcgccatcatat
agtagaagcacccgtgaagaaccttactctcctggctacaacagctttgactccaacgtt
gtgatgatcctggctgtcctattgtgtgccgtaatttgctctttaggattaaatttcatc
attaggtgtgcactaaggtgctccagttttgtgtcctccgacacgaatggccataattcc
tcagttaggctagccaataccggggtgaagaggaaggccttgaagaccttcccgattgtg
aactactcggcggaattgaagttgcctgggttggattccgagtgcataatctgcctctcc
gaatacgccatcaacgaccaggtccggatactgccgaagtgccaccatgggtttcacgtc
cggtgcatcgacaagtggctcaactcgcactcctcatgcccgacctgcaggcactgcttg
atcgagacatgccaaaagatcatgggttgcggtggtgctcaggctagcgtttcaggaccg
tcaccgtcatctcctgctcaggctttccaaatcaccatcgcgccactagagccagaaggg
ccagcgcgcaattatcacggagttgactag
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