Eucalyptus grandis (rose gum): 104418174
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Entry
104418174 CDS
T03547
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104418174
Spliceosome [BR:
egr03041
]
Common components
Common spliceosomal components
General mRNP proteins
104418174
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
104418174
NCBI-ProteinID:
XP_039157729
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All DBs
Position
9:complement(6166215..6174621)
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AA seq
623 aa
AA seq
DB search
MDFDEYEYLEKTVEGQDDRENASKPSRKSKDGASEKGDKSYRKRDVDVDADGEDRRSKRS
RNGEEENGSRRDRERDRDRDRDRDEKDRASRRDKDKDRHRSGREGDRERERERDGEREKD
RERERSSREKEKEKEKEKEKEKDRDKEKEKEKEREREKERERREREKERERRERDKERER
EEKEKEKERERSRRSSSHSRRSRSTSRPRSQRSSSRSLRHDADFEREREMEFRDNRRFKD
KKEAVEPEADPERDQRTVFAYQMPLKANERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVG
YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTATGASGTAGAYGATDRKLY
VGNLHFNMTESHLKSIFEAFGPVELVQLPLDPETGHCKGFGFVQFAQLEHAKAAQSVNGK
LEIAGRFLKISSVTDHVGAQDTTAKSADLDDDEGGLALNAQSRALLMQKLDRTGIASSIA
GSLGVPALNGAPNQQAVNLPLNKQAAVPMAMLPAQVISAATEPVGSPTECLLLKNLFDPA
TETEPDFDLDIKDDVGEECSKFGQVKHIYVDKNTAGWVYLRFENVPAAMNAQRAMHLRWF
AGRSISAIFMPPHEYEAKFQGVA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtatctggagaagacggtggagggccaggacgaccgggag
aacgcctccaagccgtcgaggaagagcaaggacggggcttcggagaagggcgacaagagc
taccggaagcgcgatgtggacgtggacgcggacggcgaggaccgaaggagcaagaggtcc
aggaacggcgaggaggagaacggctccaggagagaccgcgaacgcgaccgcgaccgcgac
cgggaccgggacgagaaggacagggcttcccgcagggacaaggacaaggaccggcatagg
agtggcagggagggcgatagggagagggagagggagagggatggggagagagagaaggat
cgcgagcgagaacggagtagtagagagaaagagaaagagaaggagaaggagaaggagaag
gagaaggatagggataaggagaaggagaaggagaaggagagggagagggagaaggagcgg
gagaggagggaaagggagaaggagagggagaggagagagagggataaggagagggagaga
gaggagaaggagaaggagaaggagagggagaggtcgaggaggagcagcagccattcgcgg
aggagtcggagcactagtcggccgcggtcgcagaggagcagtagccgctcgctgaggcac
gatgctgatttcgagagggaaagggagatggagtttcgcgacaacaggagatttaaggac
aagaaagaggcagtggaacctgaagctgatccagaaagggaccagagaacagtttttgct
taccagatgcctctgaaagcaaacgagagagacgcgtatgaatttttctcaaaagctggc
aaggtaagggacgtcaggttgataatggacaggaattcaagacgttcaaaaggtgttggg
tatatcgaattctacgatgcaatgtcagtaccaatggcaatagcgctctctggacaacta
cttcttgggcaacctgtgatggttaaaccttcggaggctgagaagaatcttgttcagtct
accgccactggtgcttcaggtactgcaggagcatatggagccacagacaggaaactctac
gtggggaatttacattttaatatgacagaaagtcatctgaaaagcattttcgaggctttt
ggtcctgttgagctggtgcaactgccccttgatccagagactggacactgcaaaggcttt
gggtttgttcaatttgctcagcttgaacatgctaaggctgctcaaagcgtaaatgggaag
ttagaaattgctggtcgttttctcaagatttcttctgtaactgatcacgttggagcacaa
gatactacagcaaaatctgcagatttggatgatgatgagggtggattggctttaaatgct
cagtcacgagcattactaatgcagaagctggatcgaactggaattgcctccagtattgcg
ggttcacttggagtccctgcactaaatggagctcctaatcaacaagctgttaacctgcct
ctcaacaagcaagctgctgttcctatggctatgcttcctgcacaagttatttctgcagcc
accgaacctgttggaagcccaacggagtgcttgctgctgaagaacctgtttgatccagcc
actgagacggagcctgattttgatttggacataaaggacgacgtgggagaagaatgttcc
aaatttggccaggtgaagcatatatacgtggacaaaaatactgctggttgggtgtattta
aggtttgaaaatgtaccagcagcaatgaatgctcagcgtgcaatgcatctgagatggttt
gcagggaggtcaatatcggcaatattcatgccaccccatgagtatgaagcaaagttccag
ggggtagcctga
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