Eucalyptus grandis (rose gum): 104418232
Help
Entry
104418232 CDS
T03547
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
egr03015
mRNA surveillance pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104418232
09122 Translation
03013 Nucleocytoplasmic transport
104418232
03015 mRNA surveillance pathway
104418232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104418232
03041 Spliceosome [BR:
egr03041
]
104418232
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104418232
Spliceosome [BR:
egr03041
]
Complex C
Other components
EJC/TREX
104418232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104418232
NCBI-ProteinID:
XP_039157582
LinkDB
All DBs
Position
9:complement(8240840..8246351)
Genome browser
AA seq
690 aa
AA seq
DB search
MSSYPILGNRPIDQWKVTELKEELKKRKLTTRGLKDDLVRRLAEAVNIERENAEKEKQVE
TELRSDPQPGISTEDGTDPVAFQSAKSVDDGDKNNDELVSNAGDDGNQREVDAKVQIDIN
DSFPVLDPPAPEGESTNVGNLGKGEEEPVLGKAEEPVVPTIVEASIPITVTSMPDVTSSD
QDLQNLETKEENRNSEIELESEHLKAPQEDVILDSPAPTNQVSEVSPSLGFQVRSDSISA
DSVSINEKNESKDNIIADNVKLELDVKPEMVEVEPSSSNVVPVGGESHLMDVEEPPENKI
AVEVKEDIDAANADMNKINEITDVGDSEKLNLDRSSGDDSLDEDVLDSKHIDSKPVSDEV
GGGSEKKEVRPVKEESPVDIMGDADMKDVSVERNGQPLLAEKRKILDQGGNGSTDPAKRQ
RRWKSESLKDVEPQRSNVTPVTTPRDGAQAQSFRPTFSRSNSAVTDDTPKERTVPPPQKP
PTTSLRIDRFLRPFTLKAVQELLGKTGSVTSFWMDQIKTHCYVTYSSVEEATETRNAVYN
LQWPLNGGRQLVAEFVDPQEVKARLEAPPTPKPAPPQDSAPTTPLNIGPTAVAPPTVQPQ
PSPRQLPLRQQHLPPPPPLPHPQAKASQERDRLPLPPPPPPPLSEKVDPTIVTLDVLFKK
TKASPRIYYLPLSEEQVAAKLAAQRRTGRQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatatccgattcttggcaaccggcctattgaccagtggaaggttacagagttg
aaggaagagcttaagaaacggaagttgactacaagaggtctgaaggatgacttggtaagg
cgcttggctgaagcagttaatattgaaagggaaaatgctgaaaaagagaagcaagtggaa
actgaattgaggtcagatccacagcccggaattagtactgaagatggaacagatcctgtt
gcatttcaaagtgcaaaaagtgtggatgatggtgataaaaataatgacgagttggtttct
aatgctggtgatgatggaaatcagagagaggttgatgctaaagttcagattgacatcaat
gacagttttccagtcctagatccacctgctccagaaggggaaagtacaaatgttggtaat
ttgggcaaaggggaggaggaaccagttttggggaaagcggaggagccagttgttcctact
attgtcgaagcaagcattccaatcaccgtgaccagtatgcccgatgtgacatcaagtgac
caagatctgcaaaatcttgagacaaaggaggagaacagaaattcagagatcgagctggag
agtgagcatttgaaggctccgcaagaggatgtcatccttgattcacctgccccaactaac
caggtatctgaggtcagcccttctttagggtttcaagtaagatctgattctatttctgct
gattctgtgtcaattaatgaaaagaatgaatctaaggataatataattgctgataatgta
aaattagagctagatgttaagccggagatggtggaagtggaaccatcgtctagcaatgtt
gtcccagttggtggcgaatcacatcttatggatgttgaagagccacctgagaacaagata
gctgttgaggttaaagaagacattgatgctgcaaatgcagacatgaacaaaatcaatgag
attacggatgtgggggactcggaaaagttaaatttagatcgaagttcaggtgatgattca
ctggatgaagacgtgttggatagtaagcacattgattcgaagcctgtctctgatgaagtt
ggaggtggaagtgagaaaaaggaagtcagacctgttaaggaggaaagccctgttgatatc
atgggtgatgctgacatgaaggatgtcagtgtggagagaaatggccagcctctgcttgca
gagaaaagaaagattcttgatcaaggcggcaacggaagtaccgatcctgcaaagaggcag
cgtaggtggaaatctgagagcctcaaagatgttgaaccacagcgttcaaatgttacacct
gtaacaacacctagggatggagcccaggcccaatcttttaggcctaccttctctagatct
aactctgcggttactgatgacacgcctaaggaacgtactgttccaccaccacaaaaacct
ccaactacttccctcagaatcgatcggtttttgcgtccctttaccctgaaagctgtccaa
gagctattgggaaaaactggttcagttaccagcttctggatggaccagattaagacccac
tgctacgttacgtattcctctgttgaagaagccactgagacgcgaaatgctgtgtataac
cttcaatggcccctgaacggtggacgtcaacttgtggctgagtttgttgacccccaagaa
gtaaaagcacggctggaggctcctccaacacctaaaccggcacctccacaggattcagct
ccgaccacacctcttaatattggtccgactgctgttgctccacctacggtgcagccccag
ccttctccccgccaactgcctcttaggcagcagcacctgcctccaccaccacctcttcca
cacccacaagcaaaggcttcacaagaaagggatcggctacccctcccgccgccaccgccg
cctccactttctgagaaagtcgaccctaccatcgtcactctagatgttctcttcaagaag
accaaagcctctccccggatatactacttgccattgtccgaggaacaagttgcagccaaa
ttagcagcacagaggagaaccggcaggcagtag
DBGET
integrated database retrieval system
