Eucalyptus grandis (rose gum): 104418349
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Entry
104418349 CDS
T03547
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104418349
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104418349
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
104418349
NCBI-ProteinID:
XP_010027974
UniProt:
A0A059ALA1
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Position
9:complement(13431731..13437369)
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AA seq
697 aa
AA seq
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MLCRAWLGYFLVAGEKMSYWRPQWSPLGPGGRRQGAAMVHLLLLWCCIVRSASTHHFPGG
RKPKPPLGVQLSLHDPGQVLIDNGLVQVTLSIPDGDVIGIRYNGIDNLLEGLNEENNRGY
WDVVWNWPGEPIKYDRIQGTIYRVVTQNEDQIEMSFVRKWSPSANHTVVPLHIDKRYIVR
RGTSGFYAYGIFERPEGLPDIEMDQVRIVYRLQNKKFHFMALSDDRQRVMPMPEDRITGQ
PLAYPEAVLLTDPINPELRGEVDDKYQYSCENQYNNVHGWICGDPPVGFWLITPSNEFRT
AGPVKQDLTSHVGPITLSMFVSTHYAGKEVGMKFQGGRPWKKVFGPVLIYLNSVPPEEDT
STLWQNAKEKMYMESKTWPYGFAESEDFPSSKERGMVVGQLLVRDRYVSKRYLWGEFAYV
GLASPGQAGSWQRENKGYQFWHRADRKGNFIINNIRAGEYNLYGWVPGTIGDYKYKGIVT
ITPGSAINLGMLVYEPPRHGPTLWEIGVPDRTASEFYVPQPYPTLMNNLYANNRQYRFRQ
YGLWERYADLYPRSDLVFHVGVDDYRKDWFFAQVTRNLYNYTFAATTWQIVFELETVKKT
AGYVLQLALASVTESDLQVRFNDPTMEPPLFATGRIGQDNAIARHGIHGLYWLYSIPVPS
SQLRRGSNTIFLTQAWAINPYQGVMYDYIRLEGPPEL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtcgagcgtggttgggttattttctcgtggctggcgagaagatgagctactgg
cggccgcaatggagtccgctcggccccggcggccggcggcagggagccgcgatggttcat
ctgctgctgctgtggtgctgcattgtccgttctgcgtcgacccaccattttccagggggc
agaaaacccaagcctcctcttggggtccagctcagtttgcacgacccggggcaggttctg
atagacaacgggcttgtccaagtaaccctatcgattccagatggagatgtcataggcatt
cggtacaatggcatcgataacttgctcgaaggcctcaatgaagaaaacaacagagggtac
tgggatgttgtttggaactggcccggagaaccgatcaaatacgacaggatacaaggaaca
atatacagggtcgtgacacaaaatgaagaccaaatagagatgtcgtttgtcagaaaatgg
agcccctcggccaaccacaccgtggtcccgctgcacatcgacaagaggtacatagtgcgc
cgtggaacctcgggattttatgcttacggcattttcgagcgaccggaaggattgccggac
atcgaaatggatcaagtcaggatcgtttacaggctccagaacaaaaagtttcatttcatg
gctttgtcggatgataggcagagagtcatgccgatgccggaggaccggatcacgggccag
ccactggcctacccggaagcggttctcttaaccgatccaatcaacccggaactcagagga
gaggtggacgacaagtaccagtactcatgcgagaaccagtacaacaatgtgcacggctgg
atctgcggcgacccgccggtgggcttctggttgatcacgcccagcaacgagttccgcacc
gccgggcccgtcaagcaggacctcacttcccacgtcggcccaatcaccctctccatgttc
gtgagcacccactatgctgggaaagaagtgggcatgaagttccagggtggacggccctgg
aagaaggtctttggccctgttctgatctatcttaactcagttcccccggaggaagacacg
agcactctctggcaaaatgccaaagagaagatgtatatggaatcaaagacctggccttac
ggtttcgccgagtcggaggacttcccttcttcgaaggagcgaggaatggttgttggccag
ttacttgttcgcgacagatatgtaagtaagagatacctgtggggggaatttgcctatgtc
ggcctagcatctccgggacaggccgggtcgtggcaaagagagaacaagggttatcagttt
tggcatcgagcagacaggaagggaaatttcataatcaacaacattcgagccggcgaatat
aatttatatggatgggttcctggtactatcggagattacaagtataaaggcattgtcact
atcacaccaggttctgcgatcaacttggggatgctcgtctacgagccgccgagacacggc
cctactctatgggagattggcgtccccgaccgtacggcttctgagttctacgtgccccaa
ccttacccaaccctcatgaataatttgtatgctaacaacagacaatacagatttaggcaa
tatggcttatgggagcgatatgcagacttataccccagaagtgatcttgtcttccatgtg
ggcgtcgatgattatcgtaaagattggttctttgcacaggtcactaggaatttatataat
tacacattcgcagcgacgacatggcagattgtgtttgaactcgagacagtgaaaaagaca
gccggttacgtcctgcaactggccttggcatctgttactgaatctgacttgcaggtacgg
ttcaacgacccgaccatggagcccccactcttcgccacagggagaattggacaggacaat
gcaatagcgagacatggcattcatggtttatactggttgtacagcattccggtgccaagc
tcgcaacttcgcaggggaagcaacacaatctttttgactcaggcctgggccataaaccct
tatcagggagtcatgtacgattacattcgactcgaagggcctccagagttgtga
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