Eucalyptus grandis (rose gum): 104418506
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Entry
104418506 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: small RNA degrading nuclease 3
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104418506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104418506
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
Pre-60S particles
RNases
104418506
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
HIP1_clath_bdg
OmpH
Motif
Other DBs
NCBI-GeneID:
104418506
NCBI-ProteinID:
XP_010028179
UniProt:
A0A059ALY5
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All DBs
Position
9:19082712..19089637
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AA seq
521 aa
AA seq
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MEDQLDMAEKKVLVEVVKMAQKRGMSGAKGVWKDFLNSYDKQLGASLSDPSRRSKEVLAA
FLKTFTDENDLKLFAKVIQCHSNRALTELFKEESPQHKSPEQRLVRLTLEHPQYPSEYSF
PSYEEEWVVIKLKKKSKVMRSTNLVAVDCEMVLCEDGTEACVRVCVVDRNLKVKLNEFVN
PGKAIADYRTEITGIAAADLDGVKCSLSDVQTSMKKLLSHGTILVGHSLNNDLQALKLDH
ARVIDTSYIFKYSDAPFQRKPSLNNLCKSVLGYEVREKGAPHNCLDDACAAMKLVLAVVE
RGCDTNIPCLHDVVPDSEVAKLLLHRIPRIVPIGELHGAMPGEFRVEPKSSKNARGDTYS
ALAVFSSMEEAHRVYESLXGTLEKDSFGRSQKVITFHLSTGTEANLCVRETMHDNSLGQL
LKKRAAEMLDSGELKKLKVSKIGEIEVAAVNQCTDHLKEIERLKEELRQKDLQIVNRCED
HSKEIERLKHELSQKDLEISVLHKIVQQHKEKELRRKSKKF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccagctggacatggcagagaaaaaagttcttgttgaagtggtgaaaatggcc
cagaaacggggaatgagcggtgctaaaggagtgtggaaggattttttgaacagttatgac
aagcaattaggggcctctttgagtgatccctccaggaggtccaaggaggttttggctgct
ttcttgaagactttcactgatgagaacgatttgaagctttttgcgaaagttattcagtgc
cattcgaaccgtgccctaacggagctattcaaagaggaatctccacagcataagtccccg
gagcagagattagttcgtctcactttggaacatccgcaatacccgtcggaatattctttc
ccatcatacgaagaggaatgggtggttataaagctcaagaaaaagtccaaggtgatgaga
tcaaccaatttggttgctgtcgactgtgagatggtgctatgtgaagatggcactgaagct
tgtgtgagagtatgtgttgtggatcgcaatctgaaggtcaaacttaatgagtttgtgaat
cctggtaaagcaattgcagattacagaactgagattacgggaattgctgcagctgatttg
gatggagttaaatgctcattatcagatgtacagacatctatgaagaagctattatcacat
ggaactattctagttggccacagtttgaacaatgatttgcaagcactgaagctggatcat
gcgagagtaattgatacctcttacatcttcaagtattctgatgcaccttttcaaagaaag
ccatctttaaataatctgtgtaagtctgttctgggctatgaagttagagagaagggtgca
ccacataattgtctagatgatgcttgtgctgcaatgaagcttgttcttgctgttgttgag
cgtggatgcgatacaaatattccgtgtctccatgatgttgtacctgattccgaagtggcc
aagctgctgcttcacaggatacctagaattgtgcccattggagaattacatggagcaatg
cctggggaatttagagttgaaccaaagtcatctaagaatgctcgtggggatacgtattca
gctttggctgttttcagcagtatggaagaggcacatcgagtctatgaaagtttangaggc
actttagagaaggactcatttggacggtctcagaaagtaattacatttcatctcagtacc
ggtactgaggctaatttatgcgtccgtgaaacaatgcacgacaactccctcggtcagttg
ttaaagaagagagcagccgagatgttggattctggggaattgaaaaaactgaaggtgagc
aagattggagagattgaggtggcagctgttaatcagtgcactgatcacttgaaagagatc
gagagattgaaggaggagctgaggcaaaaggatcttcaaatagtaaatcggtgtgaagac
cactcaaaagagattgaaagattgaagcatgagttatcccaaaaggatcttgagatctct
gttctccacaagattgtgcaacaacataaggaaaaagagctgcggagaaaatcaaagaag
ttctaa
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