KEGG   Eucalyptus grandis (rose gum): 104419229
Entry
104419229         CDS       T03547                                 
Name
(RefSeq) protein RST1
  KO
K27498  focadhesin
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104419229
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     104419229
SSDB
Motif
Pfam: DUF3730
Other DBs
NCBI-GeneID: 104419229
NCBI-ProteinID: XP_010029136
UniProt: A0A059ARE9
LinkDB
Position
9:30031118..30046525
AA seq 1852 aa
MESYAPLLEKLRLPQPSLQRRAVISIFSKLRSAPSRLDADSDPGREAVARCLLSASSAVV
DQAVRELCRLVADSKMDLPRGLLELQSALEGSEPRFVGLLVKGIGVLVRLGFQRSGGSWR
FASTEAHPFVKVLLYRAEARDELVRQVLLFVAQNKQIGMEEVCEFLRPLLYYSILRVPFS
ESSSGMFARQLLTSMASLCCSLPDDAIPMLKLLIRCMKYFPHKSADDFGSLMDCAGQIVD
AFIVVLRHFVAAQMLVSEIQLCGVELLETVLQSSIHPLKHSTWSEPVIELTKRLLLIQKD
LGLRYTCELMSISLSLFMGLVQSELEHEQVSILKVILHLLKWKTDSGYVVGNSGCAFCEE
LLFIFPAVSLMSSPSKSVKEAAGELIVILQKIIEKPLIVLENDIPIKEQIQSVSIPGKIM
FRLLQQLWLQDLSTSSRFFIETFAFSGTIESEGVSHVGRPWASKLIELSLMITDRKKCSL
PVTQAQEIFITEMPMIICTVASVLVTHQLLGPAAVDVLTAMGLADPKLGVPLLLGVLFFT
NIFARKDVGRGDMLLKVLGMLPSLASNSSMIPLVVQTILPLLHNDANPVLYSAATRLLCQ
TWTANDRAFGSLQGILLPKSFAEFGHEKVVCLSMATSIRDVCRKNPDRGVDLILSVSSCI
EMQDPLIQALGFQSLAHLCEADVVDFYTAWDVIEKHMLDYSKDPNLAHSICLLLRWGAMD
AQAYPEASGHVLQILWDIASSTHGNGIKWLKARASAFDALSQYEIPDIEKCISELRERST
SLLFLETNDEILGSMERFQVKIITYEHMNRRRFVKEKKAVTNKIEKLLDVLPQVIFSSGG
RSARECPGAALLCLSFTPKNSKSHRAYADAHAMYENMLVEIAASLQLSRNTFVALLSLQS
WKSFMRRWIRANMLSLDAKVSSVALDRPSKAAHDILKSMMRIAEESIPRSAENIALALGA
LCAVLPQSAHTAISAVSKFLLNWLFQFEHEHRQWSAAISLGVISSCLHVTDHKLKFQNIS
GLIEVLSSSKSTFVKGACGVGLGFSCQDLLTRTEAADNADRDSYKMAEVELVGNIIRSLS
ITILELTKSTSQILQSLCECFPNDMCENGRYQNPDFLNEDSDLVEEDTWGLAGLVLGLGS
SISAVYRSGEIDVTLKIKDLITSWIPHTEPFVWSSNSCNEGSEMLLSVGSCLALPMVVAF
CQRVELMDVGELNRLINSYRELISELLSVKKSGAFHQSLLMASCAGAGSLLACVVKEGID
SIEVGCLKELLELLRRCYSNPQPPSTYLGGMLGIVNSLGAEAGLVLIHPLSSNYGRYRLK
ESSHIMHALLSSPVCEPLLTSSMQEMFLVAQHSEDNQLQQYSAWALSFLRHGLWSKEVNL
DDHIQTDTTVSEVASQSFSNDSIVVKLCSWLTNVNSSKMNRPNTETGNTPDVRTIRTVLK
CLSRAPRLPNFDWKAIVRRSMRYEAEIGSSLPSDLAPQKGILRLECLNFSLAHASHFDQL
LEFLDELSDLSRFRTLEPNLQCCLLFHLADLVKVFSSSRREKLLSDIADFLLLLTSNQVY
SLDQKLLLRISCWKGLHQCLDEALLDSEEYLLGIKRCMVVLFSLLPLYHPTSIAEADRMN
FTEEWSEAVRCFEKAPRDWLLNFLQVDLDKENEQFLDVLKKIEVKVRLVRSSSIPLSELG
RLKAFLFNCNANDTWNVLVEVVATLQRAEGSIKRQWLVDAVEISCVSNFPSTPMQFIGLL
SGSCCKYMPLLILDRFSVLSDLPVTLSTLLTDPSWTVIAEHFTVTLLASTERLYHWVTQP
SCGEGTHTLQGINKSENSLAPSLLQVMHDACTSLRNYLPLEKQITLANMAIH
NT seq 5559 nt   +upstreamnt  +downstreamnt
atggagtcgtacgctccgcttctcgagaagctccggctcccgcagccttccctccagagg
cgcgccgtcatctccatcttctcgaagctccggtccgccccgagccgcctcgacgccgac
tccgatccggggcgcgaggccgtcgcccgatgcctcctgtccgcttcctccgcggtcgtc
gaccaggccgtgcgcgagctgtgccgcctcgtcgccgactcgaagatggacctcccccgc
gggctgctggagctccagtccgccctcgaaggatcggagccgaggttcgtcggtctcctc
gtgaaagggattggggtcctggtccgattgggattccagaggagcggcggctcgtggcgg
ttcgcgtcgacggaggctcatcctttcgttaaggttcttttgtaccgagctgaggcccga
gatgaactcgtgcgacaggttttgttgtttgtggcgcagaacaagcaaattggcatggag
gaagtgtgcgaattcttgagaccgcttctgtactattcaattttgagagtgccattttcg
gagtcctcgtcgggtatgttcgcaaggcaactgttgacatcaatggcatcgctttgttgc
tcattgcctgatgatgcaatccctatgctcaagcttttgattcgatgtatgaagtatttc
ccacacaagagtgctgatgatttcgggagcttaatggattgtgctgggcagatagtggat
gcatttatagttgttttgagacattttgttgcggcacaaatgcttgtttccgaaattcaa
ctttgtggagtggagctattggagactgttcttcagtcaagcattcatcctctcaagcac
tctacatggagtgagcctgttatcgaattgacaaagcgcttattgcttattcagaaagat
cttggtctgagatacacgtgtgaactaatgtcaatcagtttgtcattgtttatgggtcta
gttcaatcagaactcgaacacgaacaagtttcaatactgaaggtcatcctccatcttttg
aagtggaaaactgattcaggatacgtggttggtaactctggatgtgctttctgtgaagag
ctcttattcatatttcctgctgttagtctcatgtcatcaccttctaaatctgtcaaagaa
gcagcaggtgaattgattgtcatattgcaaaaaattatagagaaaccactgatagtactg
gagaatgacattcctattaaagagcaaattcaatcagtcagcatacctggaaaaataatg
tttaggctcttgcagcaattatggttacaggatctatccacatcatctagattctttatt
gagacttttgctttctccgggacaattgaatctgaaggagtatctcatgttggaagacct
tgggcatctaaattgatagaactctctttaatgatcactgacaggaaaaaatgctctcta
cctgtgacacaagctcaagaaatattcatcactgaaatgccaatgataatctgcacggtg
gcaagtgttttggtgacacatcagttacttgggcctgctgcagtagatgttttgactgct
atgggtctcgcggaccctaaactaggagttcctttgttgctaggcgttcttttcttcact
aatatatttgccagaaaagatgttggacgcggtgatatgctgttaaaagttttggggatg
cttccatcacttgcttcaaattcctcgatgattcctcttgttgttcagactatcttgccc
ttgcttcacaatgacgcaaatccggttttgtattcggcagcaacccgtttgctttgccag
acctggacagctaatgaccgtgcttttggaagtttgcaagggatacttcttccgaaaagc
tttgccgagtttggacatgaaaaagttgtctgtttaagtatggccacttccattcgagat
gtttgcagaaaaaatcctgataggggtgtggaccttatcctgtctgtttcgtcgtgcatc
gaaatgcaagatcctctcattcaggcgcttggttttcaaagtcttgcccacctttgtgaa
gctgatgtagtcgatttctacacggcatgggatgtcattgaaaagcacatgctagattac
tccaaagacccaaacctagcacacagcatatgccttctcctaagatggggtgcaatggac
gcccaagcttaccctgaagcttcagggcatgtcttgcaaattttgtgggacatagccagc
tcaacacatggcaatggaattaaatggttgaaggctagggcctctgcttttgatgcctta
agccagtatgagataccagatattgaaaaatgcatttcagagttaagggaaagaagcaca
tctttgctttttttggaaacaaatgatgaaatacttggctctatggaacggtttcaagtc
aagattatcacatatgaacatatgaatcgtcggagatttgtaaaggagaaaaaggctgtc
acaaataagattgaaaagctgctggatgtacttcctcaggttatattctcttcaggagga
agaagtgctagagaatgtcctggtgcagcgctgctgtgcctttcatttactccaaaaaat
tcaaagagtcacagagcttatgctgatgcacatgctatgtatgagaacatgttggtggag
attgccgcatctcttcaactctcaagaaatactttcgttgcacttctttcgttgcaatcg
tggaaatccttcatgcgacggtggattagggcgaatatgttgtctcttgatgcaaaagta
tcgtctgtagctttagatagaccatctaaagctgctcatgatattttgaagagcatgatg
agaattgctgaggagtctattcctagatctgctgagaatattgcgctggcccttggtgca
ctctgtgcggtgttgcctcagtctgctcatacggctatatcagctgtgtcgaagtttctt
ttgaattggttgttccagtttgaacatgaacatcggcagtggtctgctgcaatttctctt
ggagtgatctcaagctgtctacatgtcacagatcataaactaaagtttcagaacatctca
ggacttattgaggttttgtctagtagcaaaagcacctttgtgaaaggagcctgtggagtt
ggcttgggtttttcatgccaggatcttctaactaggactgaagctgctgataatgctgac
agagattcctacaagatggctgaagttgaattagtagggaatattatcaggtcattatct
atcacgatcttggaacttacaaaatcaacatcccagattcttcaaagtttgtgtgaatgt
ttccccaatgacatgtgtgagaatggtagatatcagaatcctgatttcttgaatgaggac
agtgatcttgtggaggaagacacctggggtcttgctggacttgttcttggtttgggcagc
tctattagtgcagtttaccgaagtggggaaattgatgtgacactgaagataaaggacttg
ataacttcatggattccacacacggagccatttgtttggagctctaactcctgcaatgaa
ggatctgagatgcttctatctgttggatcttgtcttgcacttcccatggttgtggctttc
tgccagagagtagaattgatggatgttggtgaactaaaccgactgataaatagttataga
gaacttatatctgaattattgtctgttaaaaagtcaggtgcattccaccagagcttgttg
atggcatcatgtgctggagcagggagtctccttgcctgtgttgtgaaggaaggcatagat
tccattgaagttggatgtctgaaagagttactggaattgttgaggagatgttattccaat
cctcagcctccctccacttatctgggagggatgcttggaattgttaattctttgggtgca
gaagctgggttggttctgattcatcccttatcctccaattacggtcgttacaggctgaag
gaatcttctcatataatgcatgcgcttctttcaagtcctgtctgtgagcctttgttaaca
tcatcaatgcaagagatgtttcttgttgctcaacattctgaagataatcagctgcaacaa
tactctgcctgggcactttcttttcttcgacatggtctgtggtccaaggaagtaaatttg
gatgatcatattcagactgataccactgtctcagaagttgcttctcaaagtttctccaat
gacagtatagtcgtgaaactctgctcatggttaacgaatgtgaattcatcaaagatgaat
agaccaaacacagagacagggaacacaccagatgtgagaacaattagaactgtgctgaag
tgcctttcgcgagctccaagattaccgaattttgactggaaagcaattgttaggcggtcc
atgagatacgaagcagaaattggcagctccttgccatctgatttggctcctcagaaagga
atcttgaggctggaatgcttaaatttttcgttagctcatgcatcccattttgatcaactg
ctggaatttcttgatgagctctctgacctctcaaggttcaggacacttgaaccaaatcta
cagtgttgtctgctctttcatctggctgatcttgtgaaagttttctcttcgtccaggcgt
gagaaattactctctgatatagctgatttcttgcttttacttacctcaaaccaagtttac
agccttgatcagaaacttttgttacgtatttcttgctggaagggcctccatcaatgttta
gacgaagctttacttgattctgaagagtatcttttaggtatcaaaaggtgcatggtggtg
ctcttctctttgttgcctttatatcatcctacaagtatcgctgaggcagatcgcatgaat
tttactgaagaatggtctgaagcagttagatgctttgagaaggcaccaagggattggctt
ttgaattttctacaggtggatttggataaagaaaatgagcagttccttgatgtcctaaag
aaaattgaggtgaaagtgaggttagtcaggagcagttccatcccattgtctgagctggga
agactgaaggcctttttatttaactgcaatgcaaatgacacatggaatgtgcttgttgaa
gttgtagcaactttacaacgtgctgaaggaagcattaaaagacagtggcttgttgatgca
gtggagattagctgtgtctctaattttccttctacgccaatgcaatttattggcctgctc
tcaggcagttgctgcaaatacatgcctttgttgatcctggatcgcttcagtgtcttgagt
gatcttccggttactctctctactcttttgaccgacccctcttggacagtcattgcggaa
catttcactgtgactcttttggcatcgactgagcgcctttaccattgggttacacagcca
tcctgtggtgagggtacgcatacattgcaaggtatcaataaaagcgagaacagcttagct
ccgtccctactacaagtgatgcatgatgcttgtacatccttaagaaactacttgccttta
gagaagcagatcacgcttgccaacatggcaatccattga

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