Eucalyptus grandis (rose gum): 104419348
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Entry
104419348 CDS
T03547
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egr03000
]
104419348
03036 Chromosome and associated proteins [BR:
egr03036
]
104419348
Transcription factors [BR:
egr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
104419348
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
104419348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
YL1
YABBY
CDC45
Motif
Other DBs
NCBI-GeneID:
104419348
NCBI-ProteinID:
XP_010029288
UniProt:
A0A059AQX0
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Position
9:complement(32477057..32482704)
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AA seq
635 aa
AA seq
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MTDGHLFNNISLGGRGGSNPGQIKIFSGGISWRRQGGGKAVEVDKSDIVGVTWMKVPRTN
QLGVRTKDGLHYKFTGFRDPDVISLTNFFQNTCGLTPEEKQLSVSGRNWGEVDLSGNMLT
FLVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSVMEITFHVPNSNTQFV
GDENRPPAQVFRDRIMSVADVGAGGEDAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVIITLDPPIRKGQTLYPHIVMQFETDYVVQSTLSMN
DDLFSTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLVRLKTEQEHLFRNIQ
RNEYHNLFNFISGKGLKIMNLGEQGADGVPGVLDVDDDDAVDPHLERIRIEAGVDESDEE
DEDFVIDKDDGGSPTDDSGDDESDVSESGDEKEKEKYGKKESRKEVKASSSKKKAKAGDE
EGSKKKKQKKKDPNAPKKAMSGYNFFLQTESEKMKRTNPGLSFGDVSREIADKWRGLSAA
EKAPYTAKAEEDKKRYQEQLSGYKNTSQAMNVDSD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaacatctccctcggcggccgcggcggctccaaccct
ggacagataaagattttctcaggagggatttcatggaggagacaaggaggcggcaaagca
gttgaagttgataaatctgacattgtcggggtgacctggatgaaggtgccgaggacaaat
caattaggtgtccgcaccaaagatggtttacattataagttcactggattccgagacccg
gatgttattagtttgaccaactttttccaaaatacctgcgggttaactccggaggagaaa
cagctttctgtgagtggtcggaactggggagaagttgatttgagtggtaatatgctgaca
tttcttgtgggctcaaaacaagcatttgaggtatctctggcagatgtctcgcaaacacag
cttcaaggaaagaatgatgttattttggagtttcatgtagacgatacaactggggctaat
gagaaagattctgtgatggaaattacatttcacgtgcccaactccaacacccaatttgtt
ggtgatgaaaatcgtcctcctgctcaggttttccgtgacagaatcatgtcagtggcagat
gttggggctggaggtgaagatgctgttgttacatttgagggaattgccattcttactcca
agggggcgctacagtgttgaacttcatctgtcattcttgcgacttcaaggacaggcaaat
gactttaaaattcagtacagcagtgttgttcgcttatttttgctgccaaagtctaaccaa
ccacatacatttgttatcatcactcttgatccaccaattcgcaaagggcaaactttgtat
ccgcacattgtgatgcagtttgaaaccgactatgtggttcaaagcacattgtctatgaat
gatgatttatttagcaccaagtacaaggacaagctggaaccatcttataagggactcatt
catgaagtgttcaccaccatcttgcggggtttatccggtgccaaagtcacgaaaccagga
aaatttcgtagttctcaagatggttatgcagttaaatcatcactgaaagctgaagatgga
gtcctgtacccactcgagaaaagcttcttctttttacccaagcctcctaccctgatcctt
catgaggagattgactacgtggaatttgagaggcatgctgctgggggctcgaatatgcac
tattttgatcttttagtgagattgaaaactgaacaagaacatctctttcggaatatccag
aggaatgagtaccataatctttttaacttcatcagtgggaaggggttgaagatcatgaac
ttgggagagcagggcgctgatggagtaccaggcgttcttgatgtggatgacgacgatgct
gtcgatccccatcttgagcgcatcaggattgaagccggtgtagatgaaagtgatgaagag
gatgaagattttgtcattgataaggatgatggaggatctcctactgatgattctggagat
gacgagtccgatgtcagtgaaagtggagatgagaaggagaaagagaagtatgggaaaaag
gaatctcgaaaagaagtcaaagcatcatcaagcaagaagaaagcaaaagctggagatgaa
gaggggtcgaagaagaagaaacagaagaagaaagaccccaatgcaccaaaaaaggctatg
tctggttataactttttcttgcagacggaaagcgagaaaatgaagagaactaatcccggt
ctttcctttggggatgtatcaagagaaattgcagacaagtggaggggtttgtcagcggca
gagaaagcgccatatacagcaaaagccgaggaagataaaaaacgttaccaagaacagtta
agcggttataagaatacttctcaagctatgaatgtagattcagactga
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