Eucalyptus grandis (rose gum): 104419397
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Entry
104419397 CDS
T03547
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104419397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
egr04040
]
104419397
Ion channels [BR:
egr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104419397
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF3382
TMEMspv1-c74-12
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
104419397
NCBI-ProteinID:
XP_010029345
UniProt:
A0A059AS37
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Position
9:33034175..33038593
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AA seq
717 aa
AA seq
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MPPRPAFLFFLPRWIGRQLGLLPGPGGDGGGGGGGSSGDENPVSHSIECYACTQVGVPVF
HSTSCDRAHEQPEWEASAGSSLVPIQARAGPGAGKGAGRRGGQQQRGPFGRVLDPRSKRV
QRWNRGFLLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTCVDAVHLFHL
WLQFRLAYVSRESLVVGCGKLVWDARAIASNYVGSVKGFWFDVFVILPVPQAVFWLVVPK
LIREEKIKLIMTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFI
ASHVAGGCWYVLAIQRVASCLRQQCERNVNCDFSLSCAEEVCYQLLLPAGTIGDECGGNR
TAAMARKPLCLDKNGPFHYGIYQWALPVISSDSVVVKILYPIFWGLMTLSTFGNDLEPTS
HWMEVVFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSHL
RQRVRHYEHQRWTTMGGEDEMELIKELPEGLRRDIKRYLCLDLIMKVPLFHNLDDLILDN
ICDRVKPLVFSRDEKIIREGDPVQRIVFILRGRIKRMQGLSKGMVATSLLEPGGFLGDEL
LSWCLRRPFIDRRPASSATFECMDSIEAFGLDADSLRYITDHFRYKFLNERLKWRARYYS
SNWRTWAAVNIQLAWRRHRLRTRGPMSPASEDGGSGRRNLLQYAAMFMSLRPHDHLE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcgtcccgccttcctcttctttctcccaaggtggattgggcgccagctgggg
ctgctgccggggccgggcggcgacggtggcggcggcggcggaggatcgtccggcgacgag
aacccggtgtcccactccatcgagtgctacgcgtgcacgcaggtaggagtccccgtgttc
cactccaccagctgcgaccgggcccacgagcagcccgagtgggaggcctccgcgggctcc
tccctcgtccccatccaggccagggccgggcccggggcggggaagggcgccggccgccgc
ggggggcagcagcagcgcgggccgttcgggcgggtgctggacccgcggagcaagcgggtg
cagcggtggaaccgggggttcctgctggcgcgcgggatggcgctggcggtggacccgctc
ttcttctacgcgctgtccatcggccggggcgggtcgccctgcctgtacatggacggcggg
ctggcggccatcgtgacggtgctgcggacgtgcgtggacgctgtgcacctgttccacctc
tggctccagttcaggctggcctacgtgtcgcgggagtcgctggtggtcgggtgcgggaag
ctcgtctgggacgcgcgcgccatcgcctccaactacgtcggctccgtcaagggcttctgg
ttcgacgtcttcgtcatcctccccgttccccaggccgtgttctggctggtggtgccaaag
ctgatccgggaagagaagatcaaacttatcatgaccatactcctcctcatcttcctgttc
cagttccttcccaaggtctaccacagcatctgcctgatgaggaggatgcagaaggtcacg
ggctacatcttcggcaccatctggtggggcttcggcctcaatctcatcgcctacttcatc
gcttctcatgtagctggcgggtgctggtacgtcctagcaatacagcgagtggcttcatgt
ctccgacaacagtgtgagagaaatgttaactgcgatttctctctgtcttgcgctgaggag
gtctgctaccaacttttgttacctgccggcacaataggggacgagtgtggcggaaatagg
acagctgctatggccagaaagccattgtgcttagataagaacggaccatttcactacggg
atctaccagtgggctcttccggtcatttccagcgactccgtagttgtgaagatcctttat
cccattttttggggtctgatgaccctcagcacttttggtaatgatctggagcctacgagc
cactggatggaggtggtattcagtatatgcatcgtcctcagtgggctacttctgttcact
cttttaatcggaaatatccaggtgtttctgcatgctgtcatggcgaagaagagaaaaatg
cagctgaggtgccgcgacatggaatggtggatgcggcggaggcagctgccctcccatttg
aggcagagggtgcgccattacgagcaccagaggtggacgacgatgggaggggaagacgag
atggaactgataaaagagttgccggaggggctacggcgggacatcaagcgctatctttgc
ctggacctcatcatgaaggtgccgctttttcacaacttggatgatcttattctggacaac
atctgcgaccgcgtcaagcccctcgtcttctctagagatgagaagatcattcgggaaggc
gaccccgtgcagaggattgtgttcattctgcgcggacgcatcaaacgcatgcaaggcctg
agcaaaggaatggtggcgacgagcttgctcgagcccggcggcttcctgggcgacgagctc
ttgtcctggtgcctgcggcgcccgttcatagaccgacgtccagcctcgtccgcgacattc
gagtgtatggactctatagaggcgtttggcctggatgccgacagcctccggtacattacc
gaccacttccgctacaagtttctgaacgagaggctcaaatggagagcgaggtactactca
tccaactggcgcacctgggccgcggtgaatatccagctcgcttggcgccgtcacaggctg
aggacccggggcccgatgagcccggcgtcggaagacggcggaagcgggcggcgcaatctc
ctgcagtatgccgcgatgttcatgtcactaaggccacacgatcacctcgaataa
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