Eucalyptus grandis (rose gum): 104419640
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Entry
104419640 CDS
T03547
Name
(RefSeq) vacuolar protein sorting-associated protein 35A isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104419640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104419640
Membrane trafficking [BR:
egr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104419640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
104419640
NCBI-ProteinID:
XP_010029658
UniProt:
A0A059ARK9
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Position
9:37127446..37137813
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AA seq
793 aa
AA seq
DB search
MMTGVAEDEDKWLAAGIAGLQQNAFYMHRAMDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKEETRRGCSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQLSRDKLPDIGSEYEGDADTITDAVEFVI
QNFTEMNKLWVRMQHQGPAREKERREKERSELRDLVGKNLHVLSQIEGIDLDMYKDTVLP
RILEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLEVLLSAFPQLQASVDIKTVLSQLME
RLASYAALSSEVLPEFLQVEAFSKLNSAIGKVIEAQPDMPVVGAVTLCSSLLKFSLHVHP
DRLDYADQVLGSCVKQLSGKGKIEDSKATKQIVALLSAPLEKYNNVVTALKLSNYPCVME
YLDNETNKVMATVIIQNIMKNNTHISTADKVEALFELIKGLIKDLDETLHDEVDEDDFKE
EQCSVARLIQMLHNEDPEEMFKIICVVKKHILTGGPKRLSFTVPPLVFNSLKLVRRLQGQ
EENPFGDDESTSTKKIFQLLNQIVEALSSIPAPDLALRLYLQCAEAANDCDLEPVAYEFF
TQAYIIYEEEISDSRAQVTAMHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDNLKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVMLFVEILN
KYIYFFEKGNPQITVASIQSLMELITTEMQSDTTTQDPAADAFFASTLRYIQFQKQKGGA
ISEKYGTIKLSDS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccggagtggccgaggacgaggacaaatggctcgcggcgggcatcgccggcctc
cagcagaacgccttctacatgcaccgcgccatggactcgaacaacctccgggacgccctc
aagtactcggcgcagatgctctccgagctccgcacctccaagctgtccccccacaagtac
tacgagctctatatgagggctttcgacgagttgaggaagctggagatgttcttcaaggag
gagacgcggcgggggtgctccatcgtggatctctacgagctcgtgcagcacgccggcaat
attttgcccagattgtatcttctctgcactgtaggatccgtttacattaaatctaaagag
gctcctgccaaggacattctgaaagatcttgtggaaatgtgccgaggtatccagcatcct
ttacgtggactcttcttgaggagctacctctctcaacttagtagggataaactacccgat
attggttccgagtatgaaggtgatgctgatacaattacggatgcagtggaatttgtaatc
caaaactttactgagatgaacaaactttgggtgcggatgcagcatcagggacctgctcgg
gaaaaggagagacgggagaaggaaagaagcgagctgcgtgatcttgttgggaaaaacttg
cacgtccttagtcagatagagggtatcgaccttgacatgtacaaagatactgtgcttcct
agaatcctggagcaggttgtcaactgtaaagatgagattgctcagtattacttgatggat
tgcattattcaagtatttcctgacgagtatcacttgcagacacttgaggttttgttgagt
gcatttccccagcttcaggcatctgtggacatcaagacggtcttatcccagttaatggaa
aggcttgcaagttatgctgctttaagttctgaagtgttgcctgagttcttacaggttgaa
gctttctcaaagttgaatagtgcaattgggaaggtgatagaagcacagcctgatatgcca
gttgttggagctgtaaccttatgttcatctcttcttaagttttctctccatgttcacccc
gatcgtcttgattatgcagatcaagtcttgggatcatgtgtcaagcagctctctggaaaa
ggaaagattgaagacagcaaagccacaaaacagattgttgctctattaagtgctccactt
gagaaatataataatgtggttactgcgttgaagctttcgaactatccctgtgttatggag
taccttgacaatgaaacaaataaagtgatggcaactgttattattcaaaacattatgaaa
aacaatacacatatttcgactgctgacaaggttgaggcattgtttgaactaataaaggga
cttatcaaggatttggatgaaactcttcatgatgaggtcgatgaagatgatttcaaggag
gaacaatgttctgttgcgcgtcttattcagatgttgcataatgaagatccagaagagatg
ttcaagattatatgtgttgtgaagaagcatatcttgactggagggccaaaacgcttatcc
ttcactgttcctccgcttgtttttaactctcttaagttggtcagacgattgcaaggccaa
gaagaaaacccttttggagatgacgagtcaacttcaaccaaaaagatttttcagctcttg
aatcagattgttgaggcattgtccagcattccggcacctgatctggcattgcggttgtac
ttgcaatgtgctgaggctgcaaatgactgtgacttggagccggttgcgtatgaatttttt
actcaggcatatattatatatgaggaggaaatatctgactccagagcgcaggtgactgca
atgcatctaataataggaactcttcagaggatgcatgttttcggtgttgagaacagagat
actttgacacacaaagctacagggtactctgctaagctattgaagaagcctgatcaatgc
agagctgtatacgcgtgctctcatctgttttgggtggatgatcaagacaacttgaaagat
ggagaaagggtgttgctgtgcctaaaacgtgcattgagaattgcaaatgctgcgcaacag
atgtccaatgcaacaagagggagcactggttcagtgatgctctttgttgagattctaaac
aagtatatttatttctttgagaaggggaacccgcagataactgtcgcttcaattcaaagc
ctgatggaattgattaccaccgagatgcaaagtgacactaccacccaagatccagctgcc
gatgctttctttgccagcacgttgcgttacatacagttccagaaacagaagggaggtgcc
attagcgagaagtacgggaccatcaagttgtcggattcctga
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