Eucalyptus grandis (rose gum): 104419655
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Entry
104419655 CDS
T03547
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104419655
Enzymes [BR:
egr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104419655
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104419655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
104419655
NCBI-ProteinID:
XP_039157219
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Position
9:complement(37308682..37314241)
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AA seq
624 aa
AA seq
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MSSDPAPEEDGRSGTAMRMVTYNVNGLRQRISQFGSLLRLLDSFDADIVCFQETKLRRQE
LTADVVMAEGYESFFSCTRTSDKGRTGYAGVATFCRVKSAFSSSEVALPVAAEEGFTGLL
RNGRIDENHASVAGGLEEFAKDDLLQVDSEGRCVITDHGHFVLFNIYGPRADSDDADRTE
FKLKFFKILQRRWEYLLQQGKRVFVVGDLNIAPAAIDRCEAGPDFEKNEFRKWLRSMLVE
NGGPFFDIFRARHPDRKDAYTCWPSNTGAEQFNFGSRIDHILCAGSCLHEDCDPQGHNLI
ACHIKDCDILTTYKRWKPGNTPRWKGGWSTKLEGSDHAPVYVCLEGIVDVPQHDTPSVSA
RYFPTIRGIQQTIVSVLMKRQVSEQVEGCEMSTSCLEEDVTISSCSRGTDRSFGDCGLSG
SLSSKSCASSNQSAGSVNLEVHDQSRNFAAVGASDSAHGNQYSEVKKKAKKGQGFQLSLL
SFFQRNLDSCNKDEKSNGNSSLNAVHIQKSDDQTNCNFAKDEDSRSLQQNDLDISASPLD
QSSLGKGKNDVALLEWQRIQQVMQNSIPLCKGHREPCVSRVVKKAGPNFGRRFYTCPRAE
GPASNPEANCGFFKWASSKSKQSK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgatccggcgccggaggaggacggccggagcgggacggcgatgaggatggtg
acttacaacgtcaacggcctcaggcagcggatctcccagttcggctcgctcctcaggttg
ctcgactccttcgacgccgacatcgtttgctttcaggagacgaagctgaggaggcaggag
ctcacggcggacgtggtgatggcggaggggtacgagtccttcttctcgtgtacgcgcacg
tcggataaaggccgcactgggtatgcaggggtggcgacgttttgccgggtgaagtctgca
ttttcaagcagtgaagtggctttgcctgtggcggcggaggaaggcttcacaggtctcctt
cgaaatggtagaattgatgaaaatcatgctagtgtagcaggaggccttgaggagtttgca
aaggatgatcttcttcaagttgatagtgaggggcgctgtgtcatcacagatcatggccac
tttgttcttttcaatatatatgggcctcgggctgactctgatgatgctgataggactgag
ttcaagctcaagtttttcaagatattacagagaagatgggaatatcttttgcagcagggg
aaaagagtatttgttgtaggcgatttgaacatagcgcctgctgctatagatcggtgtgag
gcaggtccagactttgagaagaatgagtttagaaaatggctaaggtctatgttggtagaa
aatggaggccctttttttgacatattccgagccagacatcctgataggaaagatgcatat
acgtgctggccttcaaataccggtgctgaacaatttaattttggatcaagaatcgaccat
atcctttgtgctggatcctgcttacatgaagactgtgatccacaaggtcataacctcata
gcttgccacatcaaggattgtgacatattaacaacatacaaacggtggaaacctgggaat
accccaaggtggaaaggaggatggagtacaaaactggaaggttctgatcacgctcctgtc
tatgtgtgtttagagggaatagttgacgtaccccaacatgacactccatcagtatctgct
agatattttcctacaattcgtggcatccagcaaacaattgtgtcagtgctaatgaagaga
caagtttctgagcaagtggaaggatgcgaaatgtcaacttcatgtttagaggaagatgtc
acaataagtagttgtagcaggggaacggacagatcctttggcgactgcggtctatctggt
tcactctccagcaaatcttgtgcttcctcaaaccaaagtgctggttctgtaaacttggaa
gtacatgatcagtctcggaattttgctgctgttggtgcatctgactctgcacatggtaac
caatatagtgaagtcaagaaaaaagctaagaaaggtcaagggtttcaactatcattgctg
tctttcttccagagaaacttagacagttgcaacaaagatgagaagtctaatggaaattct
tcactcaatgcggtgcatatacaaaagtctgatgatcagactaattgtaactttgcaaag
gatgaggatagtagaagcctccagcagaatgatttggacatcagtgcttctcctcttgat
caatcatctctggggaaaggaaaaaatgatgtggctttactggagtggcaaagaatacag
caggtgatgcagaatagcatacctctttgcaagggtcatcgtgaaccttgtgtctctcgt
gtagtaaagaaggcaggtcctaattttggtcgcagattttacacgtgccctcgtgctgag
gggcctgcctccaatcctgaagcaaattgcggtttcttcaaatgggcttcgtcaaaatct
aagcagagtaaatag
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