Eucalyptus grandis (rose gum): 104420000
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Entry
104420000 CDS
T03547
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egr03016
]
104420000
Enzymes [BR:
egr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104420000
Transfer RNA biogenesis [BR:
egr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104420000
Prokaryotic type
104420000
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
104420000
NCBI-ProteinID:
XP_018718801
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All DBs
Position
9:complement(43396293..43401625)
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AA seq
353 aa
AA seq
DB search
MTENPKSPRDCAFESWERPSKIAKSECYSDEGEAEAEEEEEGSQQAPESGVASRPMNQNP
RAQRYLVAIEYIGTRFSGSQKQPNFRTVVGVLEEAFHKFIGQPVSVLCSSRTDAGVHALS
NVCHVDVERISKRKPGEVLAPHEPQVVKRAVNHFLQRNEGDISVIDVQCVPADFHARYRA
RERTYFYRLFSGPEPLSTFEKERAWHVTEELNLVSMQEACKVLIGHHDFSSFRASGCQAN
SPIRTLDELNVTEVVSSPYFPSMVERRVESTNGATDLGFGMRKKHRCLVVTARARAFLYH
QVRLLVGVLKSIGTGDLTSSDVERILNAKDVTAASPMAPACGLYLGHVKYDLP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaatccgaaatccccacgcgactgcgccttcgagagttgggagagaccgtcc
aaaatagcgaagagcgagtgctacagcgacgaaggagaagcagaagcagaagaagaagag
gaaggatcgcagcaggcgccggaatcaggcgttgcgagtcggcccatgaaccagaaccct
cgagcacagcgctacttggtagcaatcgagtacatcgggactcgcttctcgggatcgcag
aagcagccgaatttccgaacagttgtcggcgttctcgaggaggcttttcataagttcatt
ggtcagccagtttcggtcctttgttccagtagaaccgatgcaggagttcacgctctgtcc
aacgtttgccatgtagacgtggaacgaattagcaaaagaaagcctggtgaagtgttggca
cctcatgaacctcaagtggtcaagcgagctgtgaatcattttttgcagagaaatgaaggt
gatatatcagttattgatgttcaatgcgttccggctgatttccatgctagatatagagct
cgtgagcgaacatacttctatcggctgttttccgggccagagcctctctcaacttttgag
aaggaaagagcatggcacgtaacagaggagctaaatcttgtttctatgcaggaagcatgc
aaagttctcattggacaccacgactttagttctttcagggcatcgggttgccaggccaac
tcacctatcaggacccttgatgagctcaatgttactgaagtggtctcgtctccatatttc
ccttctatggtggaaagaagagttgaaagcacaaatggtgcgactgatcttggatttggc
atgaggaaaaagcatcgatgtctagtggtaacagcacgtgctagggctttcctctaccac
caggttagactgctagttggtgttcttaaatccattggcactggagacctaactagttct
gatgttgaaagaattttgaatgcaaaggacgtgacggcagcaagtccaatggctcctgca
tgtggtctctaccttggacatgtgaagtatgacctgccctga
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