Eucalyptus grandis (rose gum): 104420031
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Entry
104420031 CDS
T03547
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104420031
03036 Chromosome and associated proteins [BR:
egr03036
]
104420031
Spliceosome [BR:
egr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104420031
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104420031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
Lsm_interact
TPR_14
HAT_Syf1_CNRKL1_C
UTP6_C
U3_assoc_6
DUF6738
Motif
Other DBs
NCBI-GeneID:
104420031
NCBI-ProteinID:
XP_010030232
LinkDB
All DBs
Position
9:complement(43615558..43628514)
Genome browser
AA seq
835 aa
AA seq
DB search
MEMEMEMVGEADRKDMADEAQDSAMPSPPDEPVGVPAGSSPSDSDSDSDSDSDSDSDSEA
QDKLQIEALESQLYNNPSDYDAHLQYIRLVRKTGDLNKLRLAREAMSALFPLTPAMWQEW
ARDEASLVVGVDGHAVIEKLYDRGVSDYLSVPLWYDFINFVRENDPSVCECSVAGVSKGR
NLFERALTAAGLHVTEGNKIWEAYREFEQALYQNIDASDAVAKDKQVQRIRNIFHRQLSI
PLVDMESTLQVYKAWEAEQGTSQDVESCDISKSFPHVASAYEKALDMYNARVNFEQQISR
EDLSKAERLQQYLIYLKFEHSVGDPARIQVLYERAITDFPISTDLWLDYTRYMDKTLKAG
DVVKGIHSRATKNCPWLGELWVRYLLCLERGCSSESEICSVFDKSLLCTFSTFEEYLDLY
LTRVDGLRRRISLAAELEVSSDYQHIRETFQRASDYLAPHLKNTDGLLRLYAYWARLESK
LAKDMVSARGVWESLLKISGSMLEAWQSYIAMEIELGHIREARSIYKRCYSKRFPGSGSE
EVCHSWLRFEREHGTLEDFDHALQKVMPRLEELQLFTLQQESRTADQKDNNIRKNDHEKR
KSGADITDEESPAKRRKGASQITKKSFLKDKGQVQNAVELRKTGDEKIKIGDGMDQQDTK
GSAPDTKSKAYTDQCTAFISNLDLKANNHHIREFFSDVGGVGEIRILKDKFTGKSRGLAY
VDFIDDAHLAAAVAKNKYMLLGKKLSIARSDPRKSRKETTGHSDHAESVGMAPQKSNYST
SKGRGEQVQLTGKNTFARPRSLKPLGWDANKPRTNEAEDEKPKSNDEFRQMFLKR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagatggagatggtcggagaagcggaccggaaggacatggccgacgaggcc
caggactcagccatgccttcacctccagacgaacccgtgggtgtccctgccggttcttcc
ccttccgattccgattccgattccgattccgactccgactccgactccgactccgaggct
caggacaagctccaaatcgaagccctagagtcccagctctacaacaatccttccgactac
gacgctcacctccagtacataaggctggtgaggaagacgggcgaccttaacaagctgaga
ctggctagggaagctatgagtgctcttttccctctgacccctgccatgtggcaggaatgg
gctcgagatgaagcttctctcgtggtcggggttgatggccatgctgtgatcgagaagctt
tatgatcgtggggtgtcggactatctgtctgttcctctttggtatgacttcataaacttt
gtgcgagaaaatgatccttcagtgtgtgaatgctcggttgctggtgtctcgaaaggtaga
aatttgtttgagcgtgctcttactgctgctgggcttcatgtaactgaaggcaataaaatc
tgggaggcatacagggaattcgagcaagctttatatcaaaatatcgatgcatctgatgct
gtggcaaaagataagcaggtccagcgaattaggaatattttccaccgccaattgtctatt
cctcttgttgacatggagagtactcttcaagtttacaaggcttgggaggcagaacaaggg
acttcacaagatgttgaatcctgtgacatcagcaagagctttcctcatgttgcctccgca
tacgagaaggctcttgatatgtataatgctcgtgtaaattttgaacagcagatatcaaga
gaggatttgtccaaggctgaaagacttcaacaatatttgatttacttgaaatttgagcac
tctgtgggagatccagcacgaatccaagttctttatgaacgtgccatcactgactttcct
atatcaactgatctttggcttgattatactcgctacatggacaaaacattgaaggctggt
gatgtagtgaagggcatccactcaagggccacaaagaattgtccttggcttggtgagctt
tgggtcagatatttactttgcttggaacgtggttgctcttctgagagtgagatttgctcg
gtttttgacaagtcattgctatgtaccttttcaacctttgaagagtacctggacttatat
ctcactcgtgtggatggcttaagacgaagaatttccttggccgcggaactagaggtttcc
tcggattatcaacatataagggaaacctttcagcgcgcttcagattatttagcacctcac
ctgaagaatacagatggcttactacgtctgtatgcttattgggctcgactggaatcaaag
ttggctaaagatatggtctctgcccgaggagtttgggagagcttgttgaagatcagtggt
tcaatgttggaagcttggcaaagttacatagcaatggagattgaactgggacatatacgt
gaggcgagatcaatctataagagatgctacagcaaaagatttcctggatccggatctgag
gaggtatgccactcctggttacgctttgagagggaacatggtactctagaagactttgac
catgccttacaaaaggtaatgcctcgtttggaggagctccagttatttacgttgcagcaa
gagtcgagaacagcagaccagaaggataataatattaggaaaaatgatcatgagaagaga
aagtctggtgcagacataactgacgaagagtctccagcaaaacggcgaaaaggcgcttca
cagataacaaaaaaatcatttctgaaggataaaggtcaagtgcagaatgcagttgagtta
agaaaaactggggatgaaaagataaagattggagatggcatggaccaacaagacacgaaa
ggctctgctccagatactaaatctaaagcatatactgaccaatgcactgcatttatatca
aatcttgaccttaaggcaaataatcaccacattcgcgaattcttcagtgatgttggtggt
gtgggtgaaattcgaattctaaaagataaattcactgggaaatccaggggactggcatat
gttgatttcattgatgatgctcaccttgctgcagctgtggcaaagaataaatatatgctc
ttaggaaagaagctgagcattgcacgttcagatccaaggaaaagcagaaaagaaactact
ggtcacagtgatcatgcagaaagtgtaggtatggcacctcaaaaatcaaactattcaact
agtaaggggagaggtgagcaggtccagctgactggtaagaacacatttgcaagaccaagg
agtcttaagcccttaggttgggatgcaaataagccaagaaccaatgaagcagaggacgag
aagcccaaatccaatgacgagttcagacaaatgtttcttaaaagatga
DBGET
integrated database retrieval system
