Eucalyptus grandis (rose gum): 104420427
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Entry
104420427 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SPATULA
KO
K28361
transcription factor SPT/ALC
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104420427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egr03000
]
104420427
Transcription factors [BR:
egr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104420427
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Motif
Pfam:
HLH
bHLH_SAC51
Ribosomal_S20p
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104420427
NCBI-ProteinID:
XP_010030576
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Position
9:21126187..21132469
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AA seq
384 aa
AA seq
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MGDGMREREAATCSSYAAAPPAAAAAXQQPDEISLFLRQVLQRSGRRAENLPGRPGGGSG
GGGGGGGGISFDRVVDSFSASASASGGGPLAGNAKLSAVGAAAAAAAAAASSVGASENEA
DDYDCESEGLEALLEDVPARPNPPRGSSKRSRTAEVHNLSEKRRRSRINEKMKALQSLIP
NSNKTDKASMLDEAIEYLKQLQLQVQMLSIRNGLSLHPMCLPGAVQPIQLPQMRMGFDEE
NAPLHMNMAPTFPVNNETSTENMFGLPNDRAVPSEPSMSNMMNSEISFGLESSIQTHRVP
FQIKQSTSRDINQEDVAPHGRHQPSIIDRSEVDPYGVNMKPAYSLSKIGLEMGETAAQSL
PRASLMSNRKGGLLESSAAGRDRP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggtatgcgggagcgggaagcggccacgtgctcctcctacgcggcggcgccc
ccagcagcagcagcagcanngcagcagcccgacgaaatctcgctcttcctccggcaggtc
ctccagcgctcgggccggagggcggagaacctccccggccgcccgggcggcggcagcggc
ggcggcggcggcgggggcggagggatctcgttcgacagggtggtcgacagcttctccgcc
tccgcgtctgcctcgggtggcgggccgctggcggggaatgcgaagctgagcgcggtcggt
gctgcggcggcggcggcggcggcggcggcttcttccgtcggggccagcgagaatgaagct
gatgattatgactgcgagagcgagggactcgaagcgttgctggaggacgttcctgccagg
ccaaatccgcctcgtggctcgtccaagcgaagtaggacagctgaagttcataatttgtca
gaaaagaggaggaggagcaggatcaatgagaaaatgaaagcattgcaaagtctaattcct
aattctaacaagactgacaaggcatcaatgctggatgaagccattgagtaccttaagcag
ctccagctccaagttcagatgttatcgataaggaacggattaagtttgcatccgatgtgc
ttacccggggccgtgcaacccattcaacttccccagatgagaatgggctttgatgaggaa
aatgcacccttgcatatgaacatggcacctacttttccagtcaacaatgaaacctcaacg
gaaaatatgtttggtctacccaatgatcgtgctgttccaagcgagccttccatgtcaaat
atgatgaactcagaaatttcttttggattggaatcgtccattcaaacacatcgtgtacca
tttcaaatcaagcaatcgacttctagggatattaaccaggaagatgtggctccacatggc
cggcatcaaccttcaattattgaccgatctgaggtggatccatatggtgtgaatatgaaa
cctgcctattctttgagcaaaattggacttgagatgggtgaaacagccgcgcagtcactt
ccccgggcttcgctaatgtctaataggaaaggtggattgctagagtcatccgcagctgga
agggatcgtccttaa
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