Eucalyptus grandis (rose gum): 104420429
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Entry
104420429 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104420429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104420429
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104420429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104420429
NCBI-ProteinID:
XP_039158073
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Position
9:21321874..21328417
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AA seq
368 aa
AA seq
DB search
MDRKLVVLGIPWEVDSDGLREYMSRFGELEDCIVMKERATGRSRGFGYVTFALAEDAKSA
LSSEHILGNRTLEVKVATPKEEMRAPPKKVTRIFVARIPPSVTESTFRSHFEKYGEISDL
YMPKDYASKTHRGIGFITYESADSVDTLMVESHELGGSTVVVDRATPKEEEFRPVGRMAQ
APMGRMAQGGYGAYNAYISAATRYAAAGAPTLYDHPGSSYERGEYARGMGKKIFVGRLPQ
EASAEDLRRYFGRFGAILDVYVPKDPRRSGHRGFGFVTFAEDGVADRVSRRTHEICGHQV
AIDSATPLXDPAAGGSLMMGAAEPFGGYGGPIRSYGRMYGSLDFDDMQWGYAYGGVRPSR
TDSRYRPY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaagctcgtggttctgggtatcccgtgggaggtcgattccgatggcttgcgg
gagtacatgagcaggttcggcgaactggaggattgtatcgtcatgaaggagcgcgcaact
ggtcgatctcgcggttttggatacgtgacttttgcattggcagaagatgctaagagtgca
ttatccagcgagcatattcttggcaatagaacattggaagtgaaagtggctacgccaaag
gaggagatgagagcccctccaaagaaagttactagaatatttgttgctaggatcccaccg
tctgtcactgagtcaaccttccggagtcactttgagaaatatggcgagatatcggactta
tatatgccaaaggactatgcttcaaaaacacaccgtggaattggttttattacttatgaa
agtgcagactcagtggacactttaatggttgaatctcatgagcttggagggtccacagtt
gttgttgatcgtgcaaccccaaaggaagaggagtttcgaccggtaggcagaatggcacag
gcaccgatgggcagaatggcacagggtggatatggtgcatataatgcttatatatcagct
gccactagatatgcggctgctggtgctccaaccttatatgatcatccaggctcaagttat
gaaagaggcgaatatgctcgaggaatggggaaaaaaatatttgtcggcaggcttcctcag
gaggcgagtgcagaagatcttcggcggtattttggtagatttggggcaatactggatgtc
tatgttcccaaggaccctaggagatcaggacatagaggttttggctttgtaacttttgcg
gaagatggagtagctgatcgtgtttctcgcagaacacatgagatttgtggacatcaggta
gcaatagattcagcaaccccgttgnatgatcctgctgctggaggaagtttaatgatgggt
gctgccgaaccctttggaggctatggtggtccaatacgttcctacggcaggatgtatgga
agcctggattttgatgatatgcaatggggttatgcatatggtggtgtgagaccatcaaga
actgatagcaggtataggccatactag
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