Eucalyptus grandis (rose gum): 104420461
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Entry
104420461 CDS
T03547
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104420461
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104420461
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104420461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_19
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
104420461
NCBI-ProteinID:
XP_010030606
UniProt:
A0A059CZQ1
LinkDB
All DBs
Position
2:complement(7342814..7369480)
Genome browser
AA seq
2093 aa
AA seq
DB search
MLLQLPRLTSSLRQPFDADEAFLRRRAALRSRRKPRNAADSVEESELARRIVHRWDEASA
EVRQAYKQFIAAVVEAVDGEVTSEEFREVALGVYGLFGGQSVGESVEDEEAAKRRIAEKK
GELQKLVGRVVSETCLQKVASQAQRLSGLQPRDHRAVAEETNGDMDDVEFGADLAFHAPS
RFLVDISVENGELLDEETSTSVSSVHDIWQDAGGYKYSQTASSGRNYDLSWLRDACDNIV
KGNSSSLSRDELAMAICRVLESDKPGEEIAGDLLDLVGDAAFETVQDVIMHREELVDAIR
HGLLALKSDKTASNAQARMPTYGTQVTVQMESERQIDKLRRKEEKRHKRGPDYVADTGLS
SASFSSLLQASEKKSPFNDLVGTGEHLLPVRELPQGTIRKHHKGYEEVIIPPTPTAEMKL
GEKLIEIKELDDLAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMIAI
LHEVGQHFRDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLAPLNVTVRELTGDMQLSKY
ELDATQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQ
VESTQSMIRIVGLSATLPNYLEVAEFLKVNAQKGLFFFDSSYRPVPLAQQYIGISEHNYF
ARTELLNEICYKKVVDSLKQGHQAMVFVHSRKDTAKTAEKLVELARKNDELDLFSNDDHP
QFSLVKREVHKSRNKDLVQLFEAGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAW
GVNLPAHTVVIKGTQLYDPKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLS
YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLRYTYLAVRMRLNPLAYG
IGWDEVVADPSLMSKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS
VETYNEMMRRHMNESEVINMVAHSSEFENIVVREEEQNELETMARTSCPLEVKGGPSNKH
GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFEICLRRGWSEMSLFMLEYCK
AVDRKVWPHQHPLRQFDKDLSPEVLRKLEERGADLDHLLEMDEKDIGALIRYGPGGRLIK
QYLGYFPSIQLSATVSPITRTVLKVDLRITPDFTWKERFHGQAERWWILVEDSENDHIYH
SELFTLTKRMPRGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYTITFHNLLLPEA
RTTHTELLDLKPLPVTSLGNPIYEALYKFSHFNPIQTQTFHILYHTDNNVLLGAPTGSGK
TISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMNDWKKRLVSQLGKQMVEMTGDYTPDL
LALLSADIIISTPEKWDGISRNWQSRGYVTKVGLIILDEIHLLGADRGPILEVIVSRMRY
ISSQTDRAVRFVGLSTALANAGDLADWLGVGDTGLFNFKPSVRPVPLEVHIQGYPGKFYC
PRMNSMNKPSYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNLPEEE
LQMVLSQITDQNLRHTLQFGIGLHHAGLNDRDRSLVEELFANNKIQVLICTSTLAWGVNL
PAHLVIIKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKK
FLYEPFPVESSLREQLHEHINAEIVSRTICHKEDAVHYLTWTYLFRRLTVNPAYYGLDET
DPETLSSYLSRLVQNTFEDLEDSGCIKMNEESVEPMMLGSIASQYYLSYLTVSMFGSNIG
PDTSLEVFLHILSGASEYNELPVRHNEELHNAQLSEKVRYKVDKNRLDDPHVKANLLFQA
HFSQLELPVSDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSISCMHLLQMVMQGLWFD
QDSSLRMLPSMNDNLEDTLRRREIATLQQLLDIPKSSLRSIIGDSCSLKLLQELEYFPQV
RMKLRIQRKGSTGENSPTLDIRLEKTNRRRSTSRAFAPRFPKVKDEAWWLVLGNTSTSEL
YALKRVSFTDHLVTHMKLPSALTDMQGVKLILISDCYLGFEQEYLIEDLPFST
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcagctccctcgcctcaccagctccctccggcagcccttcgacgccgacgag
gccttcctccgccgccgggccgccctccggagccgccgcaagcctcgcaacgccgcggat
tcggtggaggagtcggagctcgctcggaggatcgtccatcgctgggatgaagcttctgcg
gaagtgaggcaagcgtacaagcagttcatcgccgccgtggtggaggcggtggatggggag
gtgacctcggaggagttccgcgaggtggctctgggagtgtacggccttttcggagggcag
tcggtcggcgagtctgtcgaggatgaggaggcggcgaagcggagaattgcggagaagaag
ggagaactgcagaaacttgttggccgggtggtttcagagacgtgcctgcagaaagttgct
tctcaggctcagaggctctcgggcttacagccgagagaccatagggctgtggcagaagaa
acaaatggagatatggatgatgtcgaatttggtgccgaccttgcatttcatgctccatcg
cgatttcttgttgacatttctgtggaaaatggtgaattacttgatgaggagacctctaca
tctgtctcatctgttcatgatatatggcaagatgcgggaggctacaaatatagtcagaca
gccagtagtggcagaaactacgatttaagttggttgagagatgcatgtgataatatagtg
aagggcaatagttcatcactttctcgggatgaacttgccatggctatttgtcgtgtgctt
gagtcagataaacctggtgaggagattgcaggtgatttattggatcttgttggggatgct
gcatttgaaactgttcaagatgtcataatgcatcgagaggaacttgttgatgctatacgt
catggcttgttggctttgaagtctgataaaacagcttcaaatgcacaagcacgcatgcca
acttatggtactcaggtgacagtgcaaatggaatccgaacggcaaattgacaaacttcgg
cgcaaagaggaaaagcgacataagcgcggacctgactatgtggctgacactggcttatct
tctgcaagtttttcctctttactccaagctagtgagaagaaaagtccttttaacgatctt
gtcggaactggcgaacacttgctgcctgttcgtgaacttcctcagggaactataaggaaa
catcataagggatacgaagaagtcattattccaccgacacccacagcagaaatgaaattg
ggtgaaaagctgattgaaataaaggaactagatgacttggcccaagccgcttttcatggc
tataagagcctcaatcgtattcagagccggatatttcagactgtttatcatacaaatgaa
aacatattggtttgtgctccgactggggctggtaaaacaaacatagctatgattgctatt
ttacatgaggttggccagcacttcagggatggttacttgcataaggacgagttcaagatt
gtttatgttgctccaatgaaggcattggctgctgaggtcacatcaacatttagtcatcgg
ttggctccacttaatgttactgtgagggaacttactggggacatgcaactttccaaatat
gaacttgatgcaactcagatgatagtaactacaccagagaaatgggatgttattacacgc
aagagcagtgacatgtcactttctatgctggtgaagctcttgattattgacgaagtgcat
ctgttgaatgatgatagaggccctgtaatagaagcactggttgctaggactcttcgccag
gtggaatcaacacagtcaatgattcgcattgtaggcctttcagctaccctacctaattat
ctggaggttgctgaatttctgaaggtgaatgcacagaagggattgttcttcttcgattct
agctaccgtcctgtgcctcttgctcaacagtacattggtattagtgagcacaactacttt
gctcgcactgagttgttgaacgagatatgctacaagaaggttgttgattcactaaagcaa
ggtcatcaggcaatggtatttgtgcattcgcggaaggacactgcaaaaacagcagagaag
ttggttgaacttgcacgaaagaatgacgagctggatctctttagtaatgatgatcatcct
caattttcattagttaagagggaagtccacaagtccagaaacaaagatcttgttcaactt
tttgaagctggtgttggtgtccatcatgctggaatgctacgtgctgacagggggctgact
gaacgcctcttctctgatggattattgaaggtgcttgtttgcactgccactttggcgtgg
ggagtaaatcttccagcccatacagttgtcataaagggaacccaattatatgacccaaaa
gctggtggatggaaagacttgggcatgcttgatgtgatgcaaatctttggacgtgctggg
aggcctcagtttgataaaagcggcgagggaataataattacgtctcatgacaaattgtca
tactatctgcggctgctgacaagtcagcttcccatagaaagtcagtttattagctctctg
aaggataacctgaatgcagaggtggctcttggtactgtgactaatgttaaggaagcatgt
gcatggcttcgatatacctatcttgcagtgagaatgaggttgaaccctctagcttatggg
attggatgggatgaggttgttgcagatccttctctcatgtcaaagcaaagggctcttgtg
acagatgctgctcgtgcacttgacaaagcaaaaatgatgcggtttgatgagaaaagtggc
aatttttactgtactgagcttggccgtattgcaagccatttttacatccaatattctagt
gttgaaacgtacaatgaaatgatgcgacgccatatgaatgagagtgaggtcattaacatg
gttgcccattcttctgaatttgagaacattgttgtacgagaggaagagcagaatgaactt
gaaacgatggcacgcacatcgtgcccacttgaagtgaaaggaggtccttcaaacaaacat
gggaagatatccatccttattcagttatacatatctcgtggctggattgatacattttca
ttagtttctgatgctgcatatataagtgcaagtctggcccgtatcatgcgagctttgttt
gagatttgtttacgcagaggctggagtgagatgtctcttttcatgttggaatattgcaag
gctgtggatcgcaaagtttggccccatcaacatccactcagacaatttgacaaagatctt
tctccagaggtcctgcggaagcttgaggaacggggtgctgacttagatcacctgctggag
atggatgaaaaggatattggagccctgattcgctatgggcctggagggaggttaatcaag
cagtatttgggttactttccatcgatacaattgtcggcaactgttagtccaataaccaga
accgttttgaaggtggatttgcgtattacaccagacttcacatggaaagaacgttttcat
ggtcaagcagaacgttggtggatccttgttgaggattctgagaatgatcacatttatcat
tcagagctgttcactctaacaaagcggatgcctagaggtgaaccacagaagctttcattt
actgttccaatctttgaacctcaccctccgcagtactacatccgtgctgtttcggattca
tggttgcatgctgaggctttctacaccataacgttccacaatctgctgctgcctgaggca
cgtactacacatactgaacttttagatctaaagcctctaccagttacttcacttggaaac
cctatctatgaagccttgtataaattttcgcatttcaatcccattcaaacgcagaccttt
catattctctatcatacggacaacaatgttctcttgggagctccaactggaagtggcaaa
acgatatcagctgagcttgctatgcttcacctcttcaatactcagccagatatgaaggtt
atttacatagcacctttgaaggctattgttcgagagagaatgaatgattggaaaaagcgt
ctggtctctcagcttgggaaacagatggtggaaatgacaggagattatactccagatctt
ttggccctattgtctgcagacattattatatctactcctgagaagtgggatggtattagc
cgtaattggcagagtagaggctatgttactaaggttggacttattattttggatgagata
cacttactaggagctgatcgaggcccaattcttgaggtaattgtttcaagaatgagatat
atctcatctcagacagatcgagccgtgcggtttgttggcctttccactgctctagccaat
gcaggtgatttggctgactggctgggggttggggacactggactcttcaatttcaagcct
agcgtgaggcctgtacctcttgaagttcatattcaggggtatccaggaaaattttactgc
ccccggatgaatagcatgaataaaccatcatatgctgcaatctgtactcattcaccaaca
aagccagttctcatcttcgtctcatcacggcgacagacgcggctgaccgcgttggacctt
attcagtttgcagcttcagatgaacatcctaggcaatttcttaacctgcctgaagaagag
ctgcagatggttctctcccaaattactgatcaaaacctgaggcacaccttgcagtttggc
attgggctacatcatgctggactcaatgacagggatagatccttggttgaggaacttttt
gctaacaacaagatccaggtattgatatgcaccagcaccttggcatggggtgtgaatctt
ccagctcatcttgtaataatcaagggaacagagtattatgatggaaaatctaagaggtat
gttgattttccaatcaccgatattttgcaaatgatgggtcgtgccgggcgtccacaatat
gatcaacatggaaaagcagttatccttgtccatgagcccaagaaaagcttctacaaaaag
tttttgtatgagcccttcccggttgaaagcagtctacgagagcaattgcatgaacatatc
aatgcagagattgtttcccgcacaatctgccataaggaggatgcggttcattaccttact
tggacttacttgttccgaagactgacagttaatcctgcttactatgggctagatgagaca
gatcccgaaactctcagttcttacttgtccaggttagtacaaaatacttttgaagatctt
gaggatagtggatgcatcaagatgaatgaagagagtgttgaaccaatgatgctgggatca
attgcatctcaatattatctcagctacttgactgtatcaatgtttggatccaatatagga
ccggatacatctcttgaagtgtttttgcacatattatcaggtgcttcagaatataatgaa
cttcctgttcggcataatgaggagcttcacaatgctcaattgtctgagaaagtcaggtac
aaggttgataagaatcgcctagatgatccccatgttaaagccaatttgctattccaggca
catttttcacagttagagttaccagttagtgactatgtgaccgacttgaagtcagtgctg
gatcagagtattcggatcatccaggcaatgatagatatatgtgcaaacagtggttggctg
tcaagctcaatttcttgcatgcatcttctgcaaatggttatgcagggcttgtggtttgat
caagactcttctttaaggatgttgcccagtatgaatgataatctcgaggatacccttaga
agaagagaaattgcaactcttcagcaactactggatattccaaagtcatccctgcggagt
ataattggagattcttgctctctaaaattgttgcaggaactggagtattttccacaagtc
aggatgaaattgagaattcagaggaagggcagcactggagaaaattctccaactctggat
attagattagagaagaccaatcggaggagaagcacatcaagagcttttgcccctcgattt
cccaaggtgaaagatgaagcatggtggttggtacttgggaatacctccacttctgagtta
tatgcattgaagagagtttctttcacagatcacttagtcacccacatgaagttgccctca
gcactgactgatatgcagggtgtcaaattgatactcatttcggactgttatcttgggttt
gaacaagagtacctcattgaagatcttcctttcagcacgtaa
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integrated database retrieval system
