Eucalyptus grandis (rose gum): 104420791
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Entry
104420791 CDS
T03547
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104420791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104420791
03036 Chromosome and associated proteins [BR:
egr03036
]
104420791
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104420791
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
104420791
COMPASS/SET1 complex (yeast)
104420791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Vps41
KNTC1_N
Beta-prop_VPS8
Cytochrom_D1
Beta-prop_WDR35_TULP_N
VPS11_N
Motif
Other DBs
NCBI-GeneID:
104420791
NCBI-ProteinID:
XP_018718856
UniProt:
A0A059AT74
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All DBs
Position
9:37411844..37415424
Genome browser
AA seq
334 aa
AA seq
DB search
MGGVQAEREDKDKVSLELTEEILQSMEVGMTFRDYSGRISSMDFHRASSYLVTASDDESI
RLYDVASATCLKTINSKKYGVDLVSFTSHPMTVIYSSKNGWDESLRLLSLHDNKYLRYFK
GHHDRVVSLSLCPRNECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDPGLVFAI
AFGGCVRMFDARKYEKGPFEIFSVGGDVSDANVVKFSNDGRLMLLTTTDGHIHVLDSFRG
TLLYTFNVKPTSSKSTLEASFSPEGMFVISGSGDGSVYAWSVRGGKEVASWLSTDTEPPV
IKWAPGNLMFATGSSELSFWIPDLSKLGAYVGRK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgtgcaagccgagagagaagacaaggacaaggtctctctggagctcaccgag
gagatcctccagagcatggaagtcggcatgacgttcagagactatagtggtagaatcagt
tccatggattttcaccgggcctcgagctatctagtgacagccagcgatgatgagtctatt
cgcctttatgatgtggcaagcgcaacatgtctgaagacaattaatagcaaaaagtatggg
gttgatttggtctcattcacttctcatccgatgactgttatatactcctcaaagaatggt
tgggatgagtcactgaggctgttatccttgcatgacaacaagtacctgcgctactttaaa
ggtcaccatgacagggttgtctcccttagcttgtgcccacgcaatgaatgctttatctct
ggttctctggatcgcactgttttactctgggatcaacgagctgagaagtgtcagggtctt
ttacgtgtacaaggaaggcctgccacagcttatgatgatccgggcctggtgtttgcaatt
gcttttggaggatgtgttaggatgtttgatgctcgcaaatatgaaaaaggtcctttcgaa
atcttttctgttgggggagatgtgtcggatgcaaacgttgtcaagtttagcaatgacgga
aggcttatgcttttgactaccacagatgggcatatacatgttctcgactcattccgaggc
acactgttatacactttcaatgtcaagccaacatcaagcaagtccaccttggaggcatct
tttagccctgaaggaatgtttgtcatttctggttctggagatggcagtgtctatgcgtgg
agcgtaaggggcgggaaagaggtcgcaagttggttaagtactgacacggagcctcctgtc
ataaaatgggccccaggaaacctcatgttcgcaacaggatcgtcggaattatcattctgg
attcctgatctctctaaattgggagcttatgttggaagaaagtag
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integrated database retrieval system
