Eucalyptus grandis (rose gum): 104421037
Help
Entry
104421037 CDS
T03547
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104421037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104421037
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104421037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
104421037
NCBI-ProteinID:
XP_010031159
LinkDB
All DBs
Position
10:2201510..2209607
Genome browser
AA seq
1267 aa
AA seq
DB search
MGRRRDLYLSKHPFNAYPFEALCVGSWQPVESIRISHGRMTTCTVDDQYTIEESGPFTNV
RIKSRQATLSDCTCFLRPGVDICVLSPSEKSDCFGELQEPGWVDARISSIERKPHESRCC
CQFYVKLYTSKCPLGSEKGVLSQEIILVGIDDISILQRLDSKHFESQLYRWTYAEDCSLL
QRSKLLLGRFLADISWLLVTSALKQIIFNIRSLHNKIVYEICGRDGRVSFDTDNNLRTLN
FKVENEVMLPIIVQHIPTKTSEAVVAFEEHESALVPFSDVMDLRRSKRRNVQPERFLGCD
VSQLNISFHTTGLYKVDKWNNIEEDEEMSLPLSELFGLRAKSSVEHAGLKKRKWSRKRKT
TRDLVVHEKSFESREEKQTVGKRKDYHTESSTSSRKDYQNRLAIVPLGTESDPIALNQYH
PRAKIPRNRSRVNNEDPLYYSMQSSSVEQGRGFPDLEDMEFETRWVGSPPGKKIQRKKYH
QVQTKRECLTEERIYGQRTLSAGMYKDLIKSYMKSIDSTVTNNEEPLLVDQWNRLASRNH
VDRRFEVEMPSPVEEVEDPELEMLWREMELSMTSSYLFEENEGSKAELCNEYVERTINRC
HHENILDEEIGILCKLCGTVISEIRDISPAFLPSATWTTDHKTNNEQNPEHDQAEDEGLD
IFCKNDASDPKVAEENENVWTLIPELRKKLHIHQKKAFEFLWQNVTGSLLPAQMETSGKK
TGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWHKEFVKWEIPIPVY
LIHGRRSYRVFRQKSISFAGMPKPGQDVMHVLDCLEKIQKWHAHPSVLVMGYTSFLTLMR
EDSKFAHRKHMAKVLRESPGILILDEGHNPRSTKSRLRKVLMKVQTDLRILLSGTLFQNN
FCEYFNTLCLARPKFIHEVLRVLDPKFRKKTKKKARNLLESRARKFFIDNIGNKINSSNN
EERIQGLNMLRNMTSGFIDNYEAGNSDTLPGLQSYTLLMNPTDIQQHVLLKLHRIMSKYH
GYPLELELLITLGSIHPWLVKTACCASKFFNREELNQLDKHKFDIKKGSKVKFVLSLVYR
VFQKEKVLIFCHNIAPINLFLELFENIFGWRKGKEVMVLTGDLELFERGRVMDQFEEPGH
PSRILLASITACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLAA
NTLEEDKYRRTTWKEWVSSMIFSEAFVEDPSCWQRNKLEDEILREMVEEDKSKSIHMIMK
NEKASTN
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaggagagatttatatctgtccaagcatccatttaatgcatacccttttgag
gctttgtgtgtgggatcatggcaacctgtggagtcaataagaattagccatggaagaatg
accacatgcactgttgatgaccagtatacaatcgaggaaagtggacctttcactaatgtg
cggataaagtcacgtcaagcaactttatctgactgtacctgctttttgaggcctggggtg
gacatatgcgtgctttctcctagcgaaaaatcagattgctttggagaacttcaagagcct
gggtgggttgatgcacggataagttcgattgagaggaagcctcatgaatctagatgctgc
tgtcagttctatgtgaaattgtacacttccaaatgtcctcttggctcagaaaaaggagta
cttagtcaagagattattttagtaggaatagatgacatctccatcctccaaagactcgat
tctaaacattttgaaagccagctatatcggtggacgtacgccgaggactgctctttattg
cagagaagtaaattgctactaggaagattcttggctgacatttcttggttacttgtcaca
tcagccctgaaacagatcattttcaatataaggtcactgcacaataagattgtctacgag
atatgtggtcgtgatggaagagtctctttcgatactgacaataacttgagaactttgaac
ttcaaagtcgaaaatgaagttatgcttcctatcatagtccagcacattccaacgaaaaca
agtgaggcagttgttgcttttgaagaacatgaatctgcacttgtgcccttctcagatgtt
atggacttgagacgctccaaacgtagaaacgttcagccagagcgtttccttggatgtgat
gtatcccagttaaacatttcctttcatactacagggctatacaaggttgataaatggaat
aatatcgaagaagatgaagaaatgtctctaccgctctctgagctattcggtttgcgtgca
aaaagttcagttgagcatgcagggcttaagaaaaggaagtggtcccgcaaaaggaaaacc
acaagagatcttgttgtgcatgagaagtcatttgaatcgagggaggaaaaacagaccgtt
ggtaagcggaaggactatcacactgaatcaagcaccagtagtcgaaaggattaccaaaat
cgacttgctattgttcctctgggtactgaaagtgatcctattgccctcaatcaatatcat
ccacgagccaagatcccgagaaatcgttcgcgggtgaacaatgaagatccattgtattat
tctatgcaaagttcatcggtcgagcagggtaggggctttcctgatctagaagatatggag
tttgaaacaagatgggtcggaagtcctccaggcaagaaaattcaacggaaaaagtaccac
caagtacaaaccaaaagagagtgtctgactgaggagagaatctacggccaaagaacctta
agtgctggcatgtataaggatctcataaagtcttacatgaagagcattgattccacagta
acaaacaatgaagagccgcttttggtagatcagtggaacagattggccagcagaaaccat
gtggaccgccgatttgaggtggaaatgccctcacctgttgaggaagttgaagaccccgaa
ttagagatgttgtggagagagatggagctgtccatgacatcatcataccttttcgaggag
aacgagggatcgaaagctgaactgtgcaatgagtatgttgaaagaacaattaatcgctgc
caccatgagaatattctggacgaggaaatcgggattttatgcaaattgtgtggtactgtg
atctctgaaataagggatatttcaccagcatttctgccgtcagcaacctggacaacagac
cacaagacaaacaacgaacagaaccccgaacatgatcaagctgaagacgaaggtctggat
atcttctgtaagaatgatgcttcggacccaaaagtagcagaagaaaacgagaacgtatgg
accctaattcctgaacttaggaaaaaattgcacatccatcagaaaaaggctttcgagttt
ctgtggcaaaatgtgacaggatcactgctaccagctcagatggagacgtcaggcaagaag
accggtggttgtgtcatatctcatacccctggagctggaaagacttttcttataattgcg
tttcttgtcagctacttgaaattgtttccaggcaaacgaccattggttcttgctccgaag
acgacactgtatacctggcataaagaatttgtcaagtgggaaatcccaatacctgtctat
ctcatccatggtcgtcgaagctacagagtattcaggcaaaaaagtatttcatttgcagga
atgccaaaacctggtcaagatgttatgcatgttttggattgcttagagaagatacagaag
tggcatgctcatcccagcgtgcttgtcatgggatatacctcctttttaactctaatgcga
gaagactcaaaattcgctcacagaaaacacatggctaaagtattgagagaaagccccggt
atcctcattctagatgagggtcacaaccccagaagtaccaaatccaggctgcggaaagtt
ctgatgaaagttcagacggacttgagaatattgctctctgggacgctctttcagaataat
ttctgtgagtacttcaatactctttgcttggcaagaccgaagtttatccatgaagtattg
agggtactggatccaaagttcagaaagaaaacgaagaagaaagcacgcaacttgttggaa
tctcgagcgaggaagttcttcatcgataatatcggaaataaaatcaattccagcaataat
gaagaaaggatacagggcctaaacatgctgaggaatatgacaagtggattcattgataat
tatgaagctggaaattcagatactcttcccggtttacaaagctatactctattgatgaac
ccaacagatatacaacaacatgtgctgttgaagcttcacaggatcatgtctaagtaccat
ggatatcctcttgagctagaacttttaattacactcggctccatacatccttggctggtc
aaaactgcttgctgtgccagcaaattttttaacagggaggaactgaatcagcttgacaag
cacaagttcgatattaagaaagggtcaaaagtgaagttcgtccttagcctcgtgtatcgt
gtttttcagaaggagaaggttttgatcttttgccacaacattgcccccataaatttattt
ctcgaacttttcgagaacatttttgggtggcggaagggaaaagaagttatggtcctcaca
ggggacctagagcttttcgagcgagggagagtgatggatcagtttgaggagcccggtcat
ccctcgagaatacttcttgcctctataacagcctgtgctgaaggtatcagtctgactgca
gcttcccgggtgatcttactggattccgagtggaacccgtcaaaaaccaagcaggccatt
gcacgggcctttcggcccggtcagcagaagatggtttatgtgtaccagcttctggcagca
aacacgctggaggaagataaatatcgcaggaccacatggaaagaatgggtgtcaagcatg
atttttagtgaggcgtttgtggaggacccctcttgttggcaaagaaacaagcttgaggac
gagatattgagagaaatggtggaggaagacaaatcgaaatccattcatatgattatgaag
aatgagaaggcttcaacaaactaa
DBGET
integrated database retrieval system
