Eucalyptus grandis (rose gum): 104421120
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Entry
104421120 CDS
T03547
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104421120
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104421120
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
90S particles
Helicases
104421120
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104421120
NCBI-ProteinID:
XP_010031266
UniProt:
A0A059A9Y1
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Position
1:complement(42913457..42919250)
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AA seq
499 aa
AA seq
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MDQESQVDEDFPLFRKCSKQPRVPPPSSIATSSSSGLAAETSIKQVEKVKEDTSLTSTVP
GDPVTFGDLGLAEWAVQTCKELGMRKPTPVQAHCVPQILAGRDVLGLAQTGSGKTAAFAL
PILHRLSLDPYGIFALVITPTRELAYQLAEQFRALGSCLHLRCTVIVGGMDMLTQAQSLM
KRPHVVISTPGRIKVLLDENPDILPLFSNTKFLVLDEADRVLDVGFEEELRVVFQCLPKK
RQTLLFSATITSDLQTLLELSSNKPFFYEAYEGFKTVDTLKQQYVFIPKNVKDVYLFHVL
SKMEDMGIRSVMIFVSTCRSCHLLSLLLEELDQEAAALHSLKSQNLRLSALHHFKSGQVP
ILLATDVASRGLDIPTVDLVINYDIPQFPRDYVHRVGRTARAGRGGLAISFVTQDDITLI
QEIEAVLGRQLEKFDCKENDVLSDITKVYKARRVASMKMMDDGFEEKVKERKKQKRNTMA
QKGLLNKRSNKRKRRSNTS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagagtcccaagtggatgaggacttccccctcttccggaaatgctccaaacaa
cctagagtgccaccgccatcatcaatagctacttcctcctcctccggtcttgcagctgag
acgtcaataaagcaagtggagaaagtgaaggaggatactagccttactagcactgtgcca
ggggatcccgtgacgtttggagatttagggttggctgagtgggcagtgcagacatgcaaa
gagctgggaatgcgcaagccaactcccgtccaggctcactgcgtcccacaaatcctggcc
ggtcgagacgttctaggcttggcccagactggctctggaaagacggctgcctttgcactg
cccattctccaccgcctgtctcttgacccctatggcatattcgccctcgttatcactccc
accagggaattggcttatcagctggcagagcagttcagggcgttggggtcgtgcctacac
ctgaggtgtactgtgatagtgggcgggatggacatgttgacccaggcccagagtctgatg
aaaaggcctcacgttgtcatctccaccccaggcaggattaaggtcttgcttgatgagaat
cctgacatccttcctcttttctccaacaccaagttcctagttttggatgaagcggataga
gtgttggatgttggttttgaagaggagcttagagtagtctttcaatgtttgccaaagaaa
cggcagaccctgttattttctgctacaattaccagtgatctccagacgttacttgagctt
tcttcaaataagcctttcttttatgaggcatatgaaggtttcaagactgttgacactctc
aagcagcagtatgtattcatccccaaaaatgtcaaggatgtctatttatttcacgttttg
tccaaaatggaagacatgggtatccgctcggtcatgatatttgtctccacctgcagaagt
tgtcaccttctaagtttgttgctggaagaacttgatcaagaagctgcagcattgcattct
ttaaaatcccagaatttaaggctttctgctctacatcatttcaaatctggccaagttcct
atattacttgcaactgatgttgcaagtcgtggcctggatataccgactgttgatctcgtc
atcaactatgacatcccacagtttcctcgagattatgtccatcgtgttggccgtaccgca
agagcaggcagaggagggttagctattagttttgttacccaggatgacattacattgatt
caagaaattgaggctgttcttggtagacaacttgagaagtttgactgtaaagagaatgac
gtgctttcggacattacaaaggtatacaaggccagacgagtggcttcaatgaaaatgatg
gatgatggctttgaggagaaggtgaaagaacgtaaaaagcagaaacgtaatacaatggct
cagaaggggttattgaataagaggagtaacaagagaaaacgaaggtcgaacacctcgtga
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