KEGG   Eucalyptus grandis (rose gum): 104421254
Entry
104421254         CDS       T03547                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:egr03400]
    104421254
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104421254
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 Prok-RING_4 ResIII zf-ANAPC11 UBA_Rad5 zf-RING_4 zf-P11 MEIOC zf-Di19
Other DBs
NCBI-GeneID: 104421254
NCBI-ProteinID: XP_010031448
LinkDB
Position
10:3682020..3691628
AA seq 1050 aa
MGNKATDELLSTVRSVVGADFSDMDIIRALHLASNDATRAINIIFDTPNFKARERPRQPP
PPPPPTTTTTTTTQTQPRRRNAGVSNRGDGVVARGRPDEVVGRGLDGPGGGAEDGAVLRE
GVEDGGELSSGAESKWWLVGWGEVAGLSTCKGRRVKPGEKLTFTFPSKQSAASPSPGKFG
KGRSAAACSEIVRFSTKECGEIGRIPNEWARCLVPLVRDQKVKIEGWCKSAPETLGIMDS
VLLSISVYINSSMFHEQKQASLKAASNVTDESVVHPFPNLFRLLGLTPFKKAELTPNDIF
PRKRPLDSKLSSGLPIPLSRPIKSHNPCQNGDEAENEEPLSDSDVDRIVGVGDNLDLEEM
DPPCTLHCELRPYQKQALHWMVQREKGRCMDEAATTLHPCWEAYRLADKRDLVVYLNAFS
GDATIEFPSMLQMARGGILADAMGLGKTIMTIALLLTHKERGESLGSLNITQPLNEGSEI
ANTLEQSPNSSKRENKFSGFKRLMKQRMLNGGCLIVCPMTLLGQWKAEIETHVQPGSLSV
YVHYGQSRPKDAKLLAQSDVVITTYGVLTSEYSGENSGESGVLFSVRWFRVVLDEAHTIK
SSKSQISMAAAALVANCRWCLTGTPIQNSLEDIYSLLRFLRVEPWANWAWWNKLIQKPFE
EGDERGLKLVQTILKPIMLRRTKFTTDRDGRPILVLPPADMKVVYCELSEAEKDFYEALF
KKSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYADLNKLARRFL
KGSLSDLDEGNSNAPSRAYVQEVMEELRKGEVGECPICLEAFEDAVLTACAHRLCRECLL
ASWRNSNSGLCPVCRKTITRQDLITAPTESRFQVDIEQNWVESSKVSALLHELENLKSSG
SKSIVFSQWTAFLDLLQIPLSRNKIPFVRLDGSLSQQQRENVIKRFSEDNDILVLLMSLK
AGGVGVNLIAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVMIKRFIVKGTVEERMEAV
QARKQRIISGALTDQEVRTARIEELKMLFT
NT seq 3153 nt   +upstreamnt  +downstreamnt
atggggaacaaggcgacggacgagctgctgtcgaccgtccggtccgtcgtcggcgcggac
ttctcggacatggacatcatccgggccctccacctcgcgagcaacgacgccacccgggcc
atcaacatcatcttcgacacccccaatttcaaggcgcgggagaggccccggcagcctccg
ccgccgccgccgccgacgacgacgacgacgacgacgactcagactcagcctcggcggagg
aacgccggagtctcgaatcgcggcgacggcgtggttgcgagagggaggccggatgaggtc
gtggggcgcgggttggatgggccgggcggaggtgcggaggatggagcggttttgagagag
ggcgttgaagacggcggggaattgtcatcgggggctgagagcaagtggtggcttgttggg
tggggcgaagtcgctgggctatccacctgcaaggggagaagagtgaagcctggagaaaag
ctgactttcacgtttccgtcgaagcagagtgccgcgtcgccttcgcctggaaaattcggt
aaaggacggagcgctgcagcttgttcggagattgtgaggttttctacgaaggaatgcgga
gagattggtcgaattccgaatgagtgggctcgttgtcttgtgccactggtgagagatcag
aaggtgaagatcgagggatggtgcaagtctgctcccgaaacgttgggcatcatggactcg
gttttgttatcaataagtgtatacatcaacagttccatgttccacgagcaaaagcaggcc
tcgctcaaggcagccagtaatgttactgatgaatctgtggtacatccattcccaaatctg
ttccgattgctgggcctaacaccctttaagaaggctgagttgactcccaatgatatattt
ccaaggaaaaggcccttagattcaaagctcagctctggtcttccaatccctttgtcacga
ccaattaagtctcataatccatgtcaaaatggagatgaagctgaaaatgaggagccctta
tcagattctgatgttgacaggatagttggtgtcggagataatcttgatttggaggagatg
gatcctccatgtacgcttcactgtgaactccgtccatatcagaagcaggcacttcactgg
atggtccaacgggagaagggacgctgcatggatgaggcggcgaccacacttcatccatgc
tgggaggcatatcgtttggcggacaagagggatcttgttgtttatttgaatgcattctcg
ggggatgctacaatagagttcccaagcatgcttcagatggcacgaggaggaattctggca
gatgctatgggtctcgggaagaccatcatgactatagctctcctcctcactcataaggaa
agaggtgaatctttgggcagtctgaacataactcaaccactgaatgaaggttctgaaatt
gcaaacacattagagcagtctccaaattcatccaaaagggaaaataagttctcgggcttc
aaaaggttgatgaagcagaggatgttgaatggtggctgtctgattgtatgtccaatgact
ttgctaggccagtggaaggctgagattgaaactcatgtacaacctgggtctctgtctgtg
tatgttcattatggacaaagtcgaccaaaggatgcaaaactcttagcacaaagtgacgtt
gtaatcactacatatggtgttttaacctctgaatattctggagagaattctggggagagt
ggggtgcttttctcagttcggtggttcagagtggttcttgatgaggcacatactataaaa
tcctcaaagagccaaatttctatggctgctgctgccttagttgccaattgccgatggtgt
ttgactggtacccccattcagaacagtcttgaggacatctacagtcttcttcggtttctg
agagtggagccctgggccaattgggcatggtggaataaactcatccaaaaaccctttgag
gaaggggacgagagggggttgaaactggtgcaaacaatcttaaagccgattatgctgaga
agaacaaagttcaccactgatcgagatggaaggcccattctagttcttcctccagccgat
atgaaggtcgtctattgtgaattaagcgaagctgaaaaggacttctatgaagcacttttt
aaaaaatccaaggtcaagtttgatcaatttgttgagcaaggccgggttcttcacaattat
gcttcaatactggagttacttttacgtcttcgccaatgttgtgatcacccatttcttgtg
atgagtcgaggggatacacaggaatatgctgacttgaataagctagcgagacgtttcttg
aaaggaagtctgagcgacctggatgaggggaacagcaatgcaccatcgcgggcttatgtt
caagaggtcatggaagagctccgaaagggggaagtaggagaatgcccgatatgtcttgaa
gcctttgaagatgcagttctaacagcttgtgctcaccgcctatgccgagagtgtcttttg
gcaagttggcgtaattcaaattctggtttatgtcctgtttgtaggaaaactatcaccaga
caagatttgatcacggcaccaactgaaagtcgttttcaggttgatattgagcaaaactgg
gttgaatcatccaaagtttctgctctcttgcatgaacttgagaacctcaagtcttcaggc
tcaaagagcattgtcttcagccaatggactgcctttttggaccttttgcagattcctctt
tctcgaaataagattccatttgttcgtctggatgggtctctcagtcagcaacagcgtgaa
aatgtgattaaacggttttcagaagacaatgatattctggtcttactgatgtcactgaag
gctggtggggtgggagtaaatttgatagctgcttccaatgcttttgtcatggatccatgg
tggaatccagcagtggaagaacaagcggtcatgcgcattcatcgtattgggcaaacaaaa
agtgtgatgatcaaacggttcattgtgaagggaacagttgaggagaggatggaagcagtg
caagcacgtaaacagcgaatcatatccggtgctttgacagatcaagaagttcgcacggca
cgtatagaggagctgaagatgcttttcacatag

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