Eucalyptus grandis (rose gum): 104421373
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Entry
104421373 CDS
T03547
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03030
DNA replication
egr03410
Base excision repair
egr03420
Nucleotide excision repair
egr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104421373
03410 Base excision repair
104421373
03420 Nucleotide excision repair
104421373
03430 Mismatch repair
104421373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104421373
03400 DNA repair and recombination proteins [BR:
egr03400
]
104421373
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104421373
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104421373
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA_lid_RFC1
AAA
PTCB-BRCT
Rad17
AAA_30
RCF1-5-like_lid
AAA_19
AAA_22
RuvB_N
nSTAND3
HP_1247_M
BRCT_2
AAA_5
AAA_assoc_2
Gp44_lid
AAA_16
RNA_helicase
NTPase_1
TsaE
AAA_17
AAA_14
AAA_33
Sigma54_activ_2
AAA_2
NPHP3_N
AAA_18
RsgA_GTPase
AAA_24
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
104421373
NCBI-ProteinID:
XP_010031591
UniProt:
A0ACC3J3R3
LinkDB
All DBs
Position
10:5844716..5855669
Genome browser
AA seq
966 aa
AA seq
DB search
MSDIRKWFMKSHDKGNGNAKLGKPGSSDSGKTPPAKSQPDKPVHPVQENSARRKTSKYFP
AEKQKPKDEIESEEVSTKRKPQKDTEGSLKPPPHKKMHTVEDDDDDDDDFVLSTPNKPSD
VTPSKKLKSGSGRGVPKKPVDIEESDDDDHKCAKSPPKSGGRGRGGRGASAAPAGGRGRG
GGGRGGFMNFGERKDPPHKGQKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGG
RVTGSVSKKTNYLLCDEDIEGRKSAKAKELGTTFLTEDGLFDLIRSSIHTKTPVQEKSSS
TEKAVPSLTKKTPPKIDPKSVSPQGLASDSRAALKKHQITKPSSLTWTEKYRPKVPNDII
GNQSLVTQLHNWLAHWNEQFLDTGKKGKGKKQTDPSAKKAVLLSGPPGIGKTTSAKVVCK
MLGFQAVEVNASDSRGKADSKISKGIGGSNANSIKELVSNESLSVNMDWSKHPKSVLIMD
EVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQMA
KRLMHIAQAEGLQVKEIALEELAERVNGDIRLALNQLQYMSLSMSAINYDDVKQRLLSGA
KDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYMNYRPLAGGKDDNG
IKRMSLIARAAESIADGDIINVQIRRYRQWQLSQASCLASCIIPAALMHGQRETLEQGER
NFNRFGGWLGKNSTMGKNFRLLDDLHDHILASRESNSGRESLRVDYLSLLLKRLTDPLRK
LPKDEAVAEVVEFMNSYSISQEDFDTMVELSKSKGHPNPLDGIPPAVKSALTRSYNESSR
SRMVRAADLVTLPGVKKAPKKRIAAILEPSDDGLGEQNGDALAESEEENSSETEDQEDAA
NGEKKLQLDLEGLNSKAIKVELDLKGNENSSAKKKPAGRGRGRGGSAATAAKRGGSGSTP
AAKRKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatatcaggaagtggtttatgaagtcgcatgacaaaggcaatggcaatgcaaag
cttgggaaacccgggtcgagcgattcgggaaagacccctccggcaaagtctcagcctgat
aagcctgtgcatccggttcaggagaattcagctaggaggaaaaccagcaagtattttcct
gcagagaagcagaagccgaaagatgaaatagaatcagaagaggtttcaaccaaaagaaaa
cctcaaaaggataccgaaggatctctgaaaccgcctcctcataaaaaaatgcacacagtt
gaggatgacgatgacgacgacgatgactttgtcttgtccactcctaataaaccatctgat
gtcacacctagcaagaaactgaagtctggttctggtaggggagttccaaagaaaccagta
gatattgaagagagcgacgatgatgatcataagtgtgctaaatctccccctaagtctggt
ggaaggggtcgtggtggtagaggtgcatctgccgctccagctggtggaagaggcaggggt
ggtggtggacgaggtggatttatgaattttggagagaggaaagatcctcctcataaggga
cagaaggaagtccctgaaggtgctccagattgtttagcaggtttaacttttgtaatcagc
ggaacacttgatagtttggagagagaagaagcagaggatctaattaaacgccatggtggt
cgtgttaccggatcagtcagcaagaagacgaattacctgttatgtgatgaagatatcgaa
ggacggaaatccgcaaaggcgaaagagctcggaacaacttttctcacggaggatggtttg
tttgatctgatccggtcatcaattcatacaaaaacacctgttcaagagaagtccagtagt
acagagaaagctgtgccatctttgactaagaaaactccaccaaaaattgacccgaaaagt
gtatcccctcaaggtttggcatcagactcccgtgctgctttgaagaaacatcaaattact
aaaccgtcttctttgacatggactgaaaagtataggccaaaagttccaaatgacatcatt
ggaaatcagtcactggtaactcagctccataactggttggcacattggaatgaacagttt
cttgatactggaaagaaaggtaaggggaaaaaacaaactgatcctagcgctaagaaagct
gttctgttaagtggacctcctggtattggcaaaactacgtcagcaaaagtggtttgcaag
atgctaggctttcaggcggttgaggtgaatgctagtgatagtcgtgggaaggctgacagc
aagatctctaaagggataggaggcagcaatgccaattccattaaggaactcgtgagcaat
gaatccctaagtgtcaacatggattggtctaaacatcccaaatccgtccttataatggat
gaggtcgatggaatgtctgctggagatagaggaggagttgcagatcttattgccagcata
aagatctccaaaattccaattatttgcatctgtaatgatcgctacagtcagaaattgaaa
agtcttgtgaactactgcttgcttctgaactttcggaaacctacaaagcaacagatggca
aagaggttaatgcatatagctcaagcagaaggccttcaagttaaagagattgctcttgag
gaacttgctgaaagagttaatggagatatccgtttggcactcaatcaattgcagtatatg
agtctctcgatgtcagcgatcaactatgatgatgtgaaacagcgccttcttagcggtgca
aaagatgaagatatatcgcccttcacagctgtcgataagttgtttggcttcaatgggggc
aaattaagaatggatgagcggatcgacctcagcatgagtgatcctgatttggtccctctt
cttatacaggaaaattatatgaattacagacctcttgctggtggtaaggatgataatggg
ataaaacgcatgtccttaattgcccgggctgctgaatctattgccgatggggacattata
aatgtacagatacgaagatatcgccaatggcagctctctcaagctagttgccttgcttct
tgtataatccctgctgcgttgatgcatgggcaaagggagacactagaacagggtgagcgt
aatttcaacagattcggtggctggttaggaaagaactcaacgatgggcaaaaattttcga
cttttggacgatctgcatgatcatattcttgcttctcgtgaatctaattctggaagggaa
tctttgcgagttgactacctgtccctcctccttaagagattgactgatcctcttagaaag
ctgcctaaggatgaagctgttgcagaagttgtggagttcatgaattcatattcaatcagt
caggaagactttgatactatggtggagctatcaaaatctaaggggcatccaaatccctta
gatggcattccaccagctgtcaaatctgccctgaccaggtcgtataatgaaagcagcagg
tccaggatggtacgagctgcagatttagttacactaccaggagtaaagaaagcgcctaaa
aagaggattgcagctattttagaaccgtctgatgatggattgggagagcaaaatggtgat
gccttggcagaaagtgaagaggagaactcttctgaaacggaagaccaagaggatgctgct
aatggtgagaagaagctgcaattggacctcgagggactaaattctaaagctatcaaagtg
gaattggacttgaagggtaatgagaactcgagtgcaaagaagaaaccagcaggaagagga
agaggaagaggtggatcagcagccaccgcagctaagcgaggggggtcgggttccactcct
gccgcgaagagaaagcgatga
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