Eucalyptus grandis (rose gum): 104421578
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Entry
104421578 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104421578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104421578
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
104421578
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104421578
Prokaryotic type
104421578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
104421578
NCBI-ProteinID:
XP_010031873
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Position
10:complement(8983836..8989278)
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AA seq
324 aa
AA seq
DB search
MEMAPPKTLLDLFQRPSKRLRASSPSSSPAVAKSLSAAPDGGDGTTSSSSSSDLTPAQKS
RIELNKLLAKSRRNLKICSDRISRSKAEGAGYVKLEELLVEETWLKALPGSFXKPYAKNL
CKFLQAEASSAAGDVKGHVIYPPQHLIFNALNSTSFDRVKAVILGQDPYHGPGQAMGLAF
SVPEGIKLPSSLANIFKELKQDLGCSIPSHGNLERWSTQGVLLLNAVLTVRSHQANSHAK
KGWEQFTDAVIKTISNEKKGVVFLLWGNSAQEKRRLIDETKHHILKAAHPSGLSANRGFF
GCRHFSRTNQILENMGLDPIDWQL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcgccgccgaagaccctcctcgatctcttccagcggccgtcgaagcgtctc
agagcctcctccccctcctcttccccggccgtcgccaagtccctctccgccgcccccgac
ggcggcgacggaacgacctcctcctcctcctcctccgatctcacgcccgctcagaagtcc
cgcatcgagctcaacaaactcctcgccaagtctcgccgcaacctcaaaatctgctccgac
cgaatctcccgctccaaagctgaaggcgcgggctatgtgaagctggaggagctgttggtg
gaggagacatggctcaaggcgcttccggggagcttcnagaagccgtatgcgaagaatctg
tgcaagtttctccaagccgaggcgtcttccgctgctggcgatgtcaagggtcatgttata
tatccgcctcagcatctgatctttaatgctctgaactcgacctcattcgacagagtgaaa
gccgtgattctcgggcaggacccttaccatggacccggtcaggccatgggacttgccttc
tctgtccccgagggcattaagctcccctcgagtcttgccaacatttttaaggagctgaaa
caagatctcggctgctccattccttctcatgggaatctcgagagatggtccacccagggt
gttttattgctcaatgctgttctcactgtcagaagtcatcaagccaactcgcatgcaaag
aaaggatgggagcaatttactgatgctgttattaaaacaatttctaatgagaagaaagga
gtagtttttctgctctggggaaattctgctcaagagaaaagaagattgattgatgagaca
aaacatcacatactgaaagcagcacatccttctggtttgtctgcaaaccgaggctttttt
ggctgcaggcatttttctcgcacgaaccagattctggagaacatgggactcgatcccata
gactggcaattatga
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