Eucalyptus grandis (rose gum): 104421625
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Entry
104421625 CDS
T03547
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104421625
03036 Chromosome and associated proteins [BR:
egr03036
]
104421625
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104421625
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104421625
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
104421625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
104421625
NCBI-ProteinID:
XP_010031939
LinkDB
All DBs
Position
10:complement(9961995..9966707)
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AA seq
744 aa
AA seq
DB search
MAGFVELLQCVLCCEEEDIYEYRQAQRDLGDGGGLLDRIRDAFGFLPTHHHRRRGRESES
ETSEPLLWNTRRPSSPKFTRPSSSSSPGHVVVHDPMTRDPVRPKTEPNVTRTSVGSTQSS
HVTSPFKAAPSASPKPSPSVSKPSTATSSDPIVSPAKLAAISAYLDQYASRSSQSSNEPS
LSRLVHPSLSKTSSPTPSPFKAVPSASPKPSPSVSKPTTTTSRDPFVSETKPPISAHLNP
NVAKPHRPSNEPSSSQSPSSKTTSASPEAQEHSAKQYKPVLRAVSSASPNQPKETVYVQK
DTSPIYNIPEDIKDLIERDIVPGVLKKPLSPSTYRDYFAALLYAEDFYIEKWTDFILKDV
NLELHQLTVHKNVWDNDFSREKDNVTFVKFKMESIPERRPFLLSRDFVYAEPLGKRGTQK
FKGLVYRVEKWSVVLVEFGDDFHSQHHSSSRYSISFSFNRVCLKRAHQAVEAATDPSFRS
FLFPECEFRHDFSALPSLDFSNDVLYSDQRSAIRQILALKGSAPFLMEGPLCTRGLGLSR
AGVVVREAVSQAYRRSKYPRILLAAPTNKTCDVLMRSLKKDIPDSEIFRANAAFREYDGV
PDDILPSCVYKKRRECFACPPLHELRRFKVICSTFVSSFRLHNEGINAGHFSHIFLVDAS
STSEPEAMIVLANLANEDTTVIVTGQQGNRSGWVRSPIARGNGLRISYFERLKELTPYNK
LAPPFVARLDPEPESYETNSFLSY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtttgttgagttactgcaatgcgtcctctgctgcgaagaggaagacatttac
gagtatcgccaggctcagagagatcttggggacggcggtggtcttctcgatcgaattcgc
gacgcctttggtttcctgcccacgcatcatcatcgtcgtcgaggacgcgaatcggaatca
gagacgtcggagcccctgctctggaatacccgcaggccatcgtctcccaaattcacgcgt
ccttcttcatcatcctcccctggccatgttgttgtgcacgatccaatgaccagggaccca
gtcaggcctaaaactgagccaaacgtgaccaggacttcagttggctcaactcagtcttct
catgtcacgtctcctttcaaagcagccccttcggcttctcctaaaccatccccttctgta
tcgaagccgtcaaccgccacttccagtgatccgattgtttccccagccaaactggcggcc
atttcggcttacttggatcagtatgcatcgaggtcgtctcaatcttcgaatgagccgtct
ttatctcgcttggtacatccttctctgtcgaaaacatcctcaccaactccttctcctttc
aaagcagtcccttcggcttctcctaaaccatccccttctgtatcaaagccgacaaccacc
acttcgagggatccatttgtttctgagaccaagccgccaatttctgctcacttgaatccg
aatgtagccaaaccgcatcggccttccaatgagccatcttcatcacagtctccttcatcg
aaaacaacctcagcttccccagaggcgcaagaacattctgctaaacaatataagccagtc
ttacgtgcagtttcctcagcttcgccgaatcagccaaaagagaccgtttatgttcagaaa
gatacttccccaatttacaacatccccgaggatattaaagatttgatagagcgggacatt
gtgcctggggttctcaagaaaccactatctccatcaacctatagggattattttgctgct
cttctatatgcggaggacttttacatcgagaaatggactgatttcattctgaaggatgtc
aatttggagctgcatcaattgactgtacacaagaatgtatgggacaatgatttctccagg
gagaaagataatgtaacatttgtcaaattcaagatggaatctatacctgagcgtcgaccc
ttcctactatcaagggattttgtttatgcagagcccctgggtaagaggggtacacaaaag
tttaagggtcttgtatatcgagtggagaagtggtctgtcgtcttagtagaatttggggat
gattttcactcccagcatcattcaagcagcagatacagcatcagcttttctttcaataga
gtttgcttgaagagagctcatcaagcagttgaagctgccactgatccttcattccgcagc
ttccttttccctgaatgtgaattcagacatgatttctctgccttaccatctctagatttt
tcaaatgacgtgctttactcggatcaaaggtccgcaatccgtcagattctagctctcaaa
ggttcagcaccatttctcatggagggtcctctttgtacacggggtctaggcctgtcaagg
gctggagtagtggttagggaagctgtgtcgcaagcataccgacgctctaaatatcctagg
attcttctggctgcacctacaaacaaaacgtgcgatgttctgatgagaagcttgaagaag
gatattccggattcggaaatatttcgagcaaatgctgctttccgtgagtatgatggcgtg
cctgatgacattctcccttcgtgtgtttataaaaagagaagagagtgctttgcttgtcct
cccctccatgaactccggagattcaaggtaatatgttcgacttttgtgagtagcttcagg
ctacacaatgaaggcatcaatgcgggacactttagtcatattttccttgtcgatgcatca
tccacttccgagccagaggcaatgattgtgctagctaatttggccaacgaggatacaact
gttatagtcacgggtcagcagggaaatcgctcagggtgggtgcgatccccaattgctcga
gggaatggtctccggatatcatactttgagaggctcaaagaacttacaccatacaataag
ctcgcccctccattcgtcgcccgattggaccctgagccggaatcatatgaaaccaacagc
ttcctatcctattga
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