Eucalyptus grandis (rose gum): 104421643
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Entry
104421643 CDS
T03547
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104421643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104421643
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104421643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104421643
NCBI-ProteinID:
XP_010031968
UniProt:
A0A059ACJ5
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Position
10:10161460..10166465
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AA seq
258 aa
AA seq
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MAGGASATAPSTYSPSPNQKKKPPLFKDGDLDWVRPDGREFHQCRPAFFRTGAVNAAAGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDMGRLNCNVSYTTFATAVRGQVLDQKESSSMLH
KALEGAIRLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVTAVSVSC
LGPNLVIDPISEEESYQDGSLMITCMPSRYEVTQLTITGEWSSARINEAMQLCLDACSKL
GKVMRSCLKEAASASEES
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggagcgagcgcgacggcgccctcgacgtactcgccgtcgccgaaccagaag
aagaagccgccgctcttcaaggacggcgacctcgactgggtccgccccgacggccgcgaa
tttcaccagtgccggcccgcttttttcagaactggcgcagttaatgctgctgctggatct
gcttatgctgaatttggcaataccaaagtcatagtatcagtatttggccccagagaaagt
aaaaaggcaatgatgtacagtgatatgggccgattgaactgtaatgtcagttatacgact
tttgccactgcagttaggggacaggttttggatcagaaagagtcctcgtcgatgcttcat
aaagctttggagggtgcaattaggttggaaacttttccgaagacaactgttgatgtattt
gcactggttttggaatctggcgggagtgatttgcctgtggtaatatcttgtgctagtctt
gccttggcagatgctggaattatgctctatgatcttgtgactgctgtttctgtgtcttgt
ttgggtccaaatcttgtcatcgatccgatatcagaagaagaaagctaccaagatggaagt
ctgatgataacttgcatgccttctcgttatgaagtcacccagctaaccatcactggagaa
tggtcgagcgcaaggataaatgaggctatgcagctttgccttgatgcctgctcaaagctc
gggaaggtcatgagatcatgcttgaaagaagctgcttccgcatccgaggagagttga
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