Eucalyptus grandis (rose gum): 104421951
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Entry
104421951 CDS
T03547
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104421951
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104421951
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104421951
NCBI-ProteinID:
XP_010032438
UniProt:
A0A059ADV9
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Position
10:complement(14044729..14047707)
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AA seq
440 aa
AA seq
DB search
MYLQKLQFCVSIILITSSSFCFGSHRNDPYNPMARLSSVRTASRGRTSYYDSDSWRQLML
KRSRAASSSTSLKLVNVNDYGARGDGSDDTEAFMKAWEVACSAQRAALVVPQSKTYRLTP
ITFSGPCKSDVTVKIYGTIEASTDQSAYQKDPRQWLKFENLENLAVEGGGYINGNGETWW
KKSCKRDPNLPCKDAPTALTFQECNNLRVADLSIKDAQQMHLVFQKCVNVRAVNLQITAP
EESPNTDGIHVTETQNIIIDSCVIGTGDDCISIVSGSRKVQATDITCGPGHGISIGSLGA
DKSADYVSDVLINKAKLSGTKNGVRIKTWQGGSGYARNIKFENIAMTNVENPIIIDQNYC
DQKESCPQQAAAVQVTDVSYMNIRGTSASEEAIKFDCSKNHPCQDIFLQNINLQSGSSVT
EASCSNVRLTQTGRVSPHCT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcagaagctccaattttgcgtctccatcatcttaatcacctcctcatcattc
tgctttggcagccacagaaatgacccatacaacccaatggcccgcctctcctcagttagg
accgccagcaggggtcgaacctcctactatgactctgactcctggaggcagctcatgctg
aagcggagtcgagctgcctcttcatcaacttcacttaagttggtgaacgtaaatgactac
ggtgctagaggagatggaagtgatgatactgaggcattcatgaaagcctgggaggttgct
tgttctgctcagagagctgctctagtagtccctcagagcaaaacctatcgtctaacgccc
atcacattctcaggtccttgcaaatctgacgtcacagtgaagatctatggaacaatcgag
gcttctactgaccaatcagcctaccaaaaggatccaagacaatggctgaagtttgaaaac
ttggaaaacttggcagtagaaggcggtggctacataaacggcaatggagaaacatggtgg
aaaaaatcctgcaaaagagacccaaacctcccttgcaaggacgcaccaacagcgttgaca
ttccaagaatgcaacaatctcagggtagctgacttatccataaaagatgcacaacaaatg
catcttgtattccagaagtgtgtgaacgtgagagcagtgaacctccagataactgctcct
gaggaaagcccaaatactgatggaattcatgtcacagaaactcaaaatatcatcattgat
agttgtgtcattgggacaggggatgattgcatttctatagtaagtgggtcgagaaaagtt
caagctacggatataacctgtggccccggccatggcatcagcattggaagcttgggagca
gataaatcagctgactatgtttcggatgtcctaataaataaagcaaaactttcaggaacc
aagaacggtgtgagaataaagacttggcagggaggatcagggtatgcgagaaacatcaaa
tttgagaacattgcaatgaccaacgtggagaatcccataatcatagatcagaactattgt
gatcaaaaggaatcgtgtccacagcaggccgcagctgttcaagtaacggacgtgtcttac
atgaatatcagaggaaccagcgcttcagaagaggccataaaattcgactgcagcaagaac
catccatgtcaagatattttcttgcaaaacatcaacctccaaagcggatcttcagtcacc
gaagcttcttgctcaaatgttagacttacccaaactggaagagtctcccctcactgtacc
taa
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