Eucalyptus grandis (rose gum): 104422004
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Entry
104422004 CDS
T03547
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104422004
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104422004
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
104422004
NCBI-ProteinID:
XP_010032504
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All DBs
Position
10:complement(15702001..15709440)
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AA seq
459 aa
AA seq
DB search
MSTSGQPQFRYTQTPSKVIHLRNLPWECGEEELVELCQPFGKVINTKCNVGANKNQAFVE
FAELSQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVHNKSPGDVPGNVLLVTMEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDVETASAARAQLDGRSIPRYLL
PEHVKLCNLRITYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGINQPALGPDGKKTEP
ESNVLLASIENMQYAVTVDALHTVFSAFGPVQKIAIFEKNGGTQALIQYPDITTAAVAKE
ALEGHCIYDGGYCKLHLSYSRHTDLNIKAYSDKSRDYTVPDPSLLAAQPTSGHPAGPPVW
QNPAMSAATSAQSPMPGGQVPSWDQTMHARPGFVSASGSFPGQNFAPSSYPQYSAAAMPV
GSSPMPQTGQISPNAASMRMPLVNPGGASLPGQPPYYGH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtcggggcagcctcagttcaggtacacgcagaccccgtcgaaagtcatccac
ctccgcaacctaccgtgggagtgcggcgaagaggagctcgtcgagctctgccagcccttc
ggcaaggtcatcaacaccaagtgcaatgtcggcgccaacaagaaccaggccttcgtcgaa
ttcgccgagctaagccaggctatttcgatggtgtcgtattacgcttcgtcctcagaacct
gcacagattcgtggcaagaccgtgtatatccagtattccaatagacatgaaattgtgcac
aataagagtccaggggatgttcctggaaatgttttgctggttaccatggagggcgttgag
gctggtgatgtgagcatagatgtcatccacctggtattttctgcttttggatttgtacac
aaaattgccacatttgagaaggctgcaggctttcaggcacttattcaatttagtgatgtt
gagactgcatctgctgcaagggctcaactagatggaagaagtatacccaggtacctgctt
ccagagcatgtcaagttgtgtaatctgcgaattacgtattctgcccatacagatttaaac
atcaagttccagtctcatcgaagcagggactacacaaatccttatcttcctgttaatcca
actgcaattgagggaattaatcagcctgctttaggtcctgatggaaaaaagactgaacct
gagagtaatgtgcttcttgcttcaatagaaaacatgcagtatgccgttacagtggatgca
cttcacacggtgttttctgcttttggtcctgtgcaaaaaattgctatatttgagaagaat
ggtggaactcaagcattgattcagtaccctgacataacgactgctgcagttgccaaagag
gcgttagagggccattgcatatatgatggtggttattgtaagcttcatctatcatactct
cgtcatactgatctcaatataaaggcttacagtgacaaaagtagagattacacagtcccc
gatcctagtttgcttgcagcccagccgacttctggacatcctgctggcccaccagtctgg
cagaaccctgcgatgagtgctgcaacttctgcgcaatctccaatgcccgggggacaagtt
ccctcatgggatcagacaatgcatgcaagaccaggctttgtgtctgcttctggttctttt
cctggacaaaacttcgccccatccagctatcctcagtattctgctgctgccatgccagtt
ggttcttctcccatgccgcaaactggccaaatttctccaaatgcagcttccatgagaatg
cctcttgtcaatcctggaggagcttcactacctggccaaccaccttattatgggcattga
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