Eucalyptus grandis (rose gum): 104422014
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Entry
104422014 CDS
T03547
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104422014
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104422014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
PHD_2
INTS1_R4
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
104422014
NCBI-ProteinID:
XP_010032525
LinkDB
All DBs
Position
10:16006357..16020872
Genome browser
AA seq
1811 aa
AA seq
DB search
MSNPVGSSSGPGPGPGWSYRGIGLSNTVHSDVASCLPLPSLPVFFGASDQELRLFDEQGA
AGSFPRRILNRADILAQSSRIADLLGDTDVSYLKLREDLMVIPHSCVEPIKLYEEVLYQN
PEAFDCFSPGHTKEHIFQSTAHVEKPLQLNVTLASQAQKELPPYRNNLLDNALANQVSTS
SRKPKVKKKVRDEIPRDVGPSPVESQDDTVGRFSDMLEDICSKAEISGDDRDEAEWILVP
IADLRILVNEIMSVRAKKLLHLVPADTLVKLLRVLDHQIHRAEGLSIDQCDHSDPDAICS
LLCALESIHAALAIMAHNQMPKHLYSEEIIERILEFSRRQIMDIMCIYDPSYRALHKPVE
QGAPEVDEDDEADADIGPSKKRRVVKSVKAKKSAVNKVSAAASTVLQKLCTILGLLKDLL
LIEKLSDSCILQLVKTNFTTFLVDNIQLLQLKAIALISGIFYWYAQHRTYVIDEMLLLLW
KLPFSKRATRAYHLPDEDQRQIQMITALLIQLVHCSANIPELLRQASDVSSIMEVSHDGT
YLTKCHEAITEACCLFWSRVLQRFTSVKTQDASEIKVMMENLVMDLLTTLNLPEYPASAP
ILEVFCVLLLQNAGLKSKDIAARSMAIDLLGTIAARLKHDAVIYRRDKFLLLRELVDGDN
VEQNYPKDVCSACGDGRVERSLFTCQSCRRLFHAECMGAREHEVSDHSWSCQFCICRKQL
LVLQSFCKSHCKDTKRNRVDKNPESFGSITNIEVVQQLLLNFLQDSSSTDDVHVFIRWFY
LCLWYKDDPKFQENFFYYLARLKSKTIVRDSGTVSSTLTRDYIKKITLAMGQKNSFSRGF
DKILHMLLASLRENSPIIRAKALKAVSIIVETDPEVLRDKRVQLAVEGRFCDSAISVREA
ALELVGRHIASHPDVGSQYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTSACI
EIIARVSDDESSIQDLVCKTFYEFWFEEPPSSQTQIYSDGSSVPSEVAKKTEQIVQMLRR
MPNFQLLVTVIKRNLALDFLPQSSKAAGINPVLLASVRKRCELMCKSLLEKILQVEESST
EEAEVRSLPYVMVLHAFCVVDPTLLAPASDPSQFVVTLHPYLKSQGDNRVVAQLLESIIF
IIDAVLPLLRKLPPSVIEELGQDLKNMIVRHSFLTVVHACIKCLCSVSKVAGKGSSVVEY
LIQVFFKHLDSQGFENKQQMGRSLFCLGLLIRYGNSLLGYSSNRNIDVASSLSLFKRYLL
MEDFVLKIRSLQALGFVLIARPEFMLDKDVGKIIEATLSSDSDARIKMQALQNVYEYLLD
AEAQMGTEVTTNEANYTNESSQSVPVAAGAGDTNMCGGIVQLYWDRILERCLDQNAQVRQ
TALKIVEVVLRQGLVHPITCVPYLIALETDPQEINAKLAHHLLMNMNEKYPAFFESRLGD
GLQMSFIFIQIISDGSSNGGSENVPHKSPGSMKGKSDGISFAQARLGVSRIYKLIRGNRV
SRNKFMSSIVRKFDNPIWSDTVIPFLMHCTEILASLPFTMPDEPLYLIYTINRVMQVRTG
AIEANLKAFCSRSFPRDSQDVVHGSGISQGPASQPFFSNVRPLDLNGTYQELAYQPFFNH
TASVDLNGSIPQQLANQFDMCNSNFVEAKPHFSGSGEFSGSSEDDMQKIQVDCLAATALQ
LLLKLKRHLKIIYGLNDARCQSFSPNETLKPGEVLSKQNIPFNISGIHTNLPSTSQEIME
RYQEFKIALREDTIDYSAYTANIKPKRPASRRGSRRVGGGDDDDDEDDDNWSGGRVRLTN
SGRRVTRSRLR
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccagtcggttcgagttcgggtccgggtccgggtccgggttggagctaccga
ggcatagggctatcgaacaccgtgcactccgatgtggcctcgtgcttgccgttgccttcg
ctgccggtgttcttcggtgcgtccgatcaggagctaaggctgtttgacgagcagggcgcc
gccggttcgtttccccggaggattttaaatcgcgctgacatcctcgctcagtcgagtaga
atcgctgatctgcttggcgacactgatgtctcttacttaaagcttagggaggatttgatg
gtgataccgcacagctgtgtggagccgataaaactttatgaagaagttctttatcaaaat
cccgaggcctttgactgcttttctccaggtcataccaaagagcatatatttcaaagtaca
gcacatgttgagaagcctcttcaacttaatgttactcttgcaagtcaagcgcaaaaagaa
ttgcctccttatcgaaataatctgcttgataatgctcttgctaatcaagtctctacatct
tctcgaaaaccaaaggttaagaaaaaagtacgtgacgaaatccctagagatgttggacct
agtcctgttgaatcccaagatgatacggttggaaggttttctgacatgttggaggacatc
tgtagcaaagctgagatttccggagatgatagagatgaagcagagtggatcttagtgcct
attgccgatcttaggatacttgttaatgaaataatgtcagttcgtgcgaagaagctccta
catttagttcctgcagatactcttgttaaactattaagggttctagatcatcagatccat
cgagcagaaggcctgtccatcgatcagtgtgatcattcagacccagatgcaatttgctcc
ctcctctgtgctttggaatccatacatgcagctctggccataatggctcataatcagatg
ccgaagcatctttatagtgaagagatcattgagaggattcttgaattctctcgacgtcaa
ataatggatataatgtgtatctatgatccatcataccgtgctttgcataaacctgttgaa
caaggggctcctgaagtggatgaagatgatgaagcagatgcagatattggtcccagtaag
aaacgccgtgttgtaaagagtgtaaaagcaaagaaatcagcagtgaacaaggtctcagct
gctgctagtacagtacttcagaagctgtgtactattcttggtttacttaaggatctactg
ttaatagagaagctttcggacagttgcattctacagctggtgaaaacaaactttacaacg
tttttggtggataatatccagcttctccagctgaaggccattgctttaattagtgggata
ttctattggtatgcacagcatcgcacttatgtcattgatgaaatgcttcttttgctttgg
aagttgcccttctctaagcgtgcaacacgagcctatcacctgcctgatgaagatcagagg
caaattcagatgattactgccctgctgattcagttagttcactgtagtgctaacattcct
gaacttttaaggcaggcatccgacgtttcttccatcatggaagtctcacatgatggtact
tatctcacaaagtgtcatgaagcaatcacagaggcttgttgtcttttctggtcccgtgtt
ctgcagcgatttactagcgtaaagactcaggatgcatctgagataaaagtaatgatggaa
aatcttgttatggatttgctgaccacattaaacttacctgagtatcctgcttcagctcct
attctggaggtcttttgtgtcctactgctacagaacgcagggctgaaatccaaagatata
gctgcgcgatccatggccatcgaccttcttgggacgattgctgcccgcttaaagcatgat
gctgttatttacaggagggacaagtttctgttactacgagaattagttgatggtgataat
gttgagcaaaattatccaaaggatgtttgctctgcctgtggtgatgggagggtagagaga
tcattgtttacctgtcaaagctgtcgaagattgttccatgctgaatgcatgggcgcgaga
gagcatgaagtttctgatcatagctggagctgtcaattttgcatctgcagaaagcaactt
ctcgtattgcaatcattttgcaaatcccattgcaaggacaccaaaagaaatcgtgttgat
aaaaatccagaatcttttggttcaattacgaatattgaagttgtgcagcagcttcttctt
aatttcctccaagattccagttccactgacgatgtgcatgtctttattcgttggttctat
ttatgcctatggtacaaggatgatccaaaatttcaggaaaatttcttttactatcttgct
agactgaagtcaaagactatagtgcgtgattctggtactgtttcctcaactttgacaaga
gattatatcaagaagatcactttagctatgggacaaaaaaattccttttccagagggttc
gataagatccttcacatgcttttggcaagtctgagggaaaactctcctattataagggca
aaggctctaaaagcggtaagtattattgtggagaccgacccagaggtattgcgtgacaaa
cgggtgcagcttgctgttgaagggaggttttgtgattctgctatatctgtgagagaagca
gcattggaacttgtcggtaggcatattgcttcacatcctgatgttggatcacagtatttt
gagaaggttgcagagagaatcaaagacactggagttagtgtcagaaaacgagctatcaaa
atcatccgggacatgtgcacttcaaatgctaatttctctgaattcactagtgcttgcatt
gaaatcattgctcgtgttagtgatgatgagtctagtattcaggatcttgtctgcaagact
ttttatgaattttggtttgaggaaccacccagttcccagactcagatttacagtgatggt
agttctgttccatcagaggttgctaaaaagactgagcaaattgtccaaatgttaaggagg
atgccaaatttccaacttcttgtcactgttattaagcgcaatctagcacttgattttctt
ccacaatcatcgaaagctgctggaatcaaccctgttttacttgcatcagttcgaaagcgc
tgtgaattaatgtgtaaaagcttgctggaaaagattttgcaggtggaggaatcaagcact
gaggaagcagaggtgcggtcacttccttacgtgatggttctgcatgcattctgcgttgtg
gatccaacactccttgctccagcatctgatccttcccaatttgtggtgactttgcacccg
tatctcaagagtcagggtgacaatagagtggtggcacagttgctggaaagtatcatcttc
attattgatgctgttctgcctttgcttcggaagttacctccaagtgttattgaagaacta
gggcaagatttgaagaatatgattgtacgacattcttttttaactgtcgtccatgcgtgc
atcaagtgcctttgctctgtgagtaaagtagctggaaaaggttctagtgttgttgagtat
cttatacaggtgttctttaaacatttggactcacagggctttgagaacaagcagcaaatg
ggtcgttctcttttttgtcttggattgctcatccgctatggcaattctttgctgggttat
tcaagtaacaggaatattgatgtcgcaagcagtctgagcttgttcaaacggtatctgctt
atggaggattttgttttaaaaattagatctctgcaggctctgggatttgttttaattgca
aggcctgaatttatgttggacaaggatgtaggcaaaataatagaagccacattgtcttct
gattctgatgctcgaattaagatgcaagctctccagaatgtgtatgaatatcttcttgat
gctgaagctcaaatgggaacagaggttacaactaatgaggcaaattacaccaatgaaagc
agtcagagcgttcctgttgctgctggtgcaggagatactaacatgtgtgggggtatagtt
caactctactgggataggatactggagaggtgcttagaccaaaatgcacaagttcgacaa
actgccctcaagattgtggaagtggttttacgtcaaggtcttgtgcatcccattacatgt
gttccataccttatagcactcgaaactgatccacaggagataaatgcaaagttggctcat
catttgctgatgaacatgaatgagaagtatcctgcttttttcgaaagtcgtttaggggat
gggctgcaaatgtcctttatatttatacaaattattagcgatggttcctctaatggtggg
agtgagaatgtccctcataagagtccagggagcatgaaggggaaatctgatggtatctca
tttgctcaagcaaggcttggagtttcaaggatctacaaactaattcgtggaaatcgggtt
tccaggaacaaatttatgtcctcaattgtgcgcaaatttgataatccaatatggagtgat
acagtcattccttttctgatgcactgcacagagattcttgcttcattgccgtttacaatg
cctgatgagccactctatttgatttatacgataaatcgagtaatgcaagttcggactggg
gccattgaggcaaatttaaaggcattttgttcaagatcgtttccaagagacagccaggat
gtggttcatgggagtgggattagtcaagggccagcttctcaacctttcttcagtaatgta
cgaccactggatttgaatggcacataccaagagttggcttatcaaccatttttcaatcat
acggcatcagtcgacttgaatggaagtatcccacaacagctagcaaatcagtttgatatg
tgcaattctaattttgtggaggcaaagccccattttagtgggtccggtgaattttctggc
agctctgaggatgatatgcagaaaatccaggttgactgtctagctgctacagcattgcag
cttctgttgaaactaaagaggcacctaaaaattatttatggcctcaacgatgctcggtgc
cagtcattttctccaaatgagacgctaaaacctggcgaagttctctccaagcagaatatt
ccatttaatattagtggaatacataccaacttgccttccacttctcaagaaatcatggaa
agatatcaggaatttaagattgctttgagagaagacaccattgattactctgcttacaca
gcgaacatcaaaccaaagcggcctgcctctagaagaggttccagacgtgtgggcggtggg
gatgacgatgatgacgaggatgatgacaactggtcaggaggcagggtccgtctaactaat
agtggaaggagagttacaaggagcaggttgaggtaa
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integrated database retrieval system
