Eucalyptus grandis (rose gum): 104422131
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Entry
104422131 CDS
T03547
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104422131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104422131
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104422131
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104422131
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
104422131
NCBI-ProteinID:
XP_010032666
UniProt:
A0A059AE42
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Position
10:18711942..18714771
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AA seq
376 aa
AA seq
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MEASRVGVTNWKGDRRARTSNGEILSGREDDDHAPSSSVLGRRRRSPSSGHQSEQGEGSR
SRRRLAEEGEEGGGEEEEDRGSDSERRDELKPSDDELEEQDRDPSEFAERYGDEYSSDRS
GSPPCGRTDGSFKVTVTDPDVFDCAVCLEPLTIPVFQCENGHIACSSCCRKISNKCPSCS
MPIGYNRCRAMEKVLESVQMACRNAKFGCHQKFGYHMKNDHEKTCLFAPCSCPFSSCSYV
GSFRILVKHFSTKHGASPTSFCFNFNTFFLMNVETEVRLLKEAREDVLFVLKNETVDLGN
KIKISCIGPLPKAAYLYDIVAKSRESSLKLHTCTKSFSDFEYNPNLEPYLLVPRGFFDDF
LGLKLEVCIWRSGAID
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctcgcgcgttggcgtaacaaattggaagggagatagacgggccaggacaagc
aatggtgaaattctcagtggacgggaagacgatgaccatgcgcccagcagctccgtgctt
ggcaggaggcgccgttcgccttcttccggccatcaatccgaacaaggagaaggtagccga
agccgacgccgactcgccgaggaaggagaagagggaggcggagaagaagaggaagaccgg
ggttcagacagcgaacggagagacgaattgaaaccgagcgatgacgaattggaagagcag
gatcgagacccatcggagtttgcggaacggtacggggacgagtactcgtccgatcgtagt
gggtcccctccatgtggccggacggatgggtcgttcaaagtcactgtcacggacccagat
gtgtttgactgcgccgtctgtctcgagcctttgacgatcccggttttccagtgtgagaat
gggcacatagcttgctcttcctgctgcagaaagataagcaacaaatgcccgtcctgctct
atgcctattggctacaacagatgccgcgccatggagaaagtcctggagtctgtccagatg
gcatgtcgaaatgcaaagtttggctgccatcagaagtttggttaccacatgaaaaatgac
catgagaagacgtgtttgttcgcgccttgttcgtgtcccttttccagttgcagctacgtt
ggctcatttaggattttagtgaagcacttcagcaccaagcatggggcttctccgacatcc
ttctgtttcaacttcaacacctttttcttgatgaatgttgagacggaggtccgtttgctt
aaagaagcaagagaagatgttctctttgtcttgaaaaacgaaactgtcgacctgggcaac
aagattaagatcagttgcattggccccttgccaaaggcggcttatttgtacgacatagtc
gcaaaatctcgagaaagctctctcaagcttcacacttgcaccaagagcttttcagacttt
gaatataatcctaatttggagccttaccttttggtgccaagagggttcttcgatgatttc
ttgggtctcaagttggaagtgtgcatttggcgcagcggagcaatagattaa
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