Eucalyptus grandis (rose gum): 104422500
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Entry
104422500 CDS
T03547
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104422500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104422500
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104422500
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
U-box type E3
104422500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
zf-C3HC4_4
MLKL_N
Arm_2
zf-Nse
KAP
zf-C3HC4_2
PDS5
zf-C3HC4
MCAfunc
DUF6833
BORCS6
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104422500
NCBI-ProteinID:
XP_010033134
UniProt:
A0A059AH17
LinkDB
All DBs
Position
10:26660373..26664226
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AA seq
665 aa
AA seq
DB search
MEADGGAAAAAALAEGLIARVGEIASICDYRCAVKRQYCNLARRLKLLVPMFEEVRESRR
PVGEGAAAALASLKEALEAARDLLRFGSEGSKIYMVLEREQLMSKFDEVTEQIERALSAI
PYEELDISDEVQEQVELVLAQFRRAKGRTDPPDMELYQDLLSLYESNDAAADPTVLRRLT
EKLQLMEITDLTQESLALYEMVSASGEDPGKSIENMSMLLKKIKDFVQTENPDMDPPAKV
EGSPAHSAGEASADGNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEEGH
GTCPKTQQTLANTTLTPNYVLRSLIAQWCEANGIEPPKRPASSHPNKVTSAFSPADRTKI
EVLLRKLISGIPEEQHSAAGEVRLLAKRNADNRVAIAEAGAIPLLVSLLLTPDSRTQEHA
VTALLNLSICENNKGTIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDEYKVTIGA
SGAIPALVALLSEGTQRGKKDAATALFNLCIYQGNKGKAVRASIVPTLMRLLTEPEATMV
DEALAILAILASHSEGKAAIGAAEAVPVLVEFIGRGSPRNRENAAAILAHLCSADQRHLV
KAQELGVMGPLMDLAQNGTDRGKRKAAQLLERISRYVEQKKQAQAQTEADNQIRHHELPL
SERDS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacggcggggcggcggcggcggcggcgctcgcggagggcctcatcgcgagg
gtcggcgagatcgcctccatctgcgactaccggtgcgcggtgaagaggcagtactgcaac
ctcgcccggcggctgaagctcctggtcccgatgttcgaggaggtccgggagtcgaggcgg
ccggtcggcgagggggcggcggcggccctggcgtcgcttaaggaggcgctggaggctgcc
agggatctgctccggttcgggagcgaggggagcaagatttacatggtcctagagagggag
caactaatgagcaagttcgatgaggtgacggagcagatagaacgagctctaagtgcgatt
ccctatgaagaacttgatatatcggatgaagttcaggagcaggttgagcttgttcttgca
cagttcagaagagccaaaggacggactgatccaccggacatggaactatatcaagatcta
ttgtctctttatgagagcaatgacgcagctgcagatccaactgtcctaaggagattgact
gagaagttgcaattgatggaaataactgaccttacacaggaatctcttgctctatatgag
atggtttctgctagcggtgaagatccagggaagagcattgagaacatgtcgatgctgttg
aagaaaattaaagattttgttcagacagagaaccctgatatggatcctcctgcaaaagta
gaaggttcaccggcgcattcagctggagaagcatccgctgatggaaaccacaaagccccc
gttataccagatgatttccgctgtccaatatcattagagttgatgaaggatccagtcatt
gtttcgacaggacagacctatgaacgctcttgcattgagaaatggctggaagaagggcat
ggaacttgcccaaagacacaacaaaccctcgccaacaccaccctgaccccgaactatgtc
ttgcgcagcctcatagctcagtggtgtgaagcaaatggcatcgagccgcctaaacgtcct
gcgagctctcaccctaataaagttacttccgccttctcacctgcagatcgtacgaagatt
gaagttcttctccgtaaactaatctctggcatccccgaagagcagcactctgctgcaggt
gaggtccgccttcttgcgaagcgcaacgcagataatcgcgtcgccattgctgaagctggc
gcgattcctctcctagtaagtctcctcttaacacccgactctcgcacgcaggagcatgcc
gtaacagctcttttaaacttatccatatgcgaaaacaacaagggaaccatcgtctcttcg
ggagcagttcccggaatagttcatgttctgaagaagggaagtatggaagcgcgggaaaat
gcagcagccacccttttcagcctttcagtcgtggatgaatacaaagtcaccattggcgct
tcaggcgcgatcccagcactagtagcgcttctaagtgaaggtacccaaagggggaagaaa
gatgctgcaacagcacttttcaatttgtgtatataccagggcaacaaaggaaaggccgtg
agggccagtatcgtgcccacgctaatgcgactgctcaccgaacctgaggctaccatggtg
gacgaggccttggccatattagcgatactcgccagtcactccgaaggaaaggcagccatc
ggagctgccgaggcagtgcctgttctcgtagagttcatcggccgtggttctccgcgaaac
agagagaatgcagctgcgattctggcgcatctctgctctgcggatcagaggcacctagta
aaggcacaagaactcggagtgatgggtccgctcatggatttggcgcaaaacgggacagat
agagggaagagaaaggcggcacaattactcgagcgaataagccggtatgtcgagcagaag
aagcaggctcaggcgcaaactgaagccgataatcagattcgccaccatgagctgccgctc
tccgaaagagatagctaa
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