Eucalyptus grandis (rose gum): 104422552
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Entry
104422552 CDS
T03547
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104422552
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104422552
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Gene cluster
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104422552
NCBI-ProteinID:
XP_010033216
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Position
10:complement(27397651..27399446)
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AA seq
438 aa
AA seq
DB search
MAAMKLVGFILALSLAVLVPSLEAHIKEFDEYWQKRAEEASQAALEAFNPEPENVTAQFN
ANVNKVLDGNNSTRRQLHMHKYSGPCLATNPIDRCWRCRKNWAKDRKRLAKCVLGFGRKT
TGGLKGKYYVVYDCSDNDVVNPKPGTLRHAVIQKRPLWIIFARSMVIRLNQELMVASHKT
IDGRGANVHIAFGAGITIQFVRNVIIHNIRIHDIVTRPGGIIRDAVDHVGIRTMSDGDGI
SIFGSTNIWIDHVSMKRCQDGLIDAIEGSTAITISNGHYTHHNDVMLFGASDLYPRDKIM
QVTVAFNHFGKGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSSQPTIISQGNRFIAPPN
LAAKEVTKRDYATPDVWRSWTWRSQGDLLINGAFFVQSGQPLRKKYGRKDMIKAKPGTFV
RRLTRFSGTLNCKPKKRC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatgaagcttgttgggttcatcttggccttgtccttggctgtcctagttccg
agcctcgaggctcatatcaaggagttcgacgagtactggcagaagcgcgcggaggaggcc
agccaggctgctctcgaggcgtttaaccccgaacccgaaaacgtcacagcccagttcaat
gcgaacgttaacaaggtcttagatggaaacaacagcacaaggaggcaattgcacatgcac
aagtactccggcccgtgcctcgctacgaacccgatcgaccggtgctggcggtgcaggaag
aactgggcgaaggaccggaagaggctggccaagtgcgtgctcggattcggccgcaagacc
actggaggcttgaagggtaagtactacgtcgtctacgattgctcggacaacgacgtggtc
aacccaaagcctgggacgctccgccacgccgtgatccagaagcggcctctgtggatcatc
ttcgcacgcagcatggtcatcaggctgaaccaggagctgatggtggcgagccacaagaca
atagatggccggggcgcgaatgtgcacatcgccttcggtgccggcatcacgatccagttc
gtcaggaacgtgatcatccacaatatccgcatccacgacatcgtcacgaggcccgggggc
atcatcagggacgcggttgaccatgtggggatcaggacaatgagtgacggcgatggcatc
tccatcttcggctcgaccaacatctggatcgatcacgtgtccatgaaaagatgccaggac
gggctcatcgacgccattgagggctccactgccatcactatctcgaacggccactacacc
caccataacgacgtgatgctcttcggcgcgagcgacttatatccaagagacaagattatg
caggtgaccgtcgccttcaaccactttggcaagggtctgattcagcggatgccgaggtgc
cgatggggcttcttccacgtcgtcaacaacgactacacccattggctcatgtacgccatc
gggggcagctcgcagcccaccatcatctcccagggcaaccgcttcatcgcaccgcccaac
ttggcggctaaggaggtgaccaagagggactacgcaacgccggacgtgtggcgcagctgg
acatggagatcacagggcgatctgttgataaatggggccttcttcgtgcagtcagggcag
ccactgaggaagaagtacgggaggaaggacatgatcaaggcgaagcccgggacgttcgtg
agacggctcacgcgcttctcaggcactctcaattgcaagcctaagaaaaggtgctaa
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