Eucalyptus grandis (rose gum): 104422578
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Entry
104422578 CDS
T03547
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104422578
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104422578
REST complex
104422578
Heterochromatin formation proteins
Other heterochromatin formation proteins
104422578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
EF-hand_13
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
104422578
NCBI-ProteinID:
XP_010033244
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All DBs
Position
10:27984715..27995764
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AA seq
1396 aa
AA seq
DB search
MKRTRDDVYPGSQFKRPFGSSRGEYYGQSQVTGTGAMENGGGVVGGGSASQKLTTNDALT
YLKEVKDMFQDQREKYDTFLEVMKDFKAQRTDTTGVIARVKELFKGHNKLILGFNTFLPK
GFEISPDEDETPIKKNVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNKYRKEHKDINEV
YSEVENLFGDHQDLLEEFTKFLPDNSATASTHNFPYARNSFQRQHERSSATPTLRQMQID
KQRARRDRIINAHAEHDINVDRPDLDDDKAMIKVQKDQRKRFEKDNRDRRNREVDDRESE
HDTSRDFNSQRFPDKRKSARKVENYGMTSCEDRDALKSMYNQGFIFCEKVKERLCSSDDY
QAFLKCLHMYSSDIIRKNDLQNLVRDLLGKHPDLMEEFNGFLERCENIDGFLAGIVSKRS
LSADGHMSWTAKAEDKDKEHKRENDGAKDKERCKDKYMFKSIQELDLSNCQRCTPSYRLL
PDDYPIPSVSQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDM
LLESVSSTAKRAEEVWNNINENINNLETPIPIENYFTALNLRCIERLYGDHGLDVMDILR
KNPAVALPVMLIRLKQKQEEWTRCRSDFNKIWAEIYAKNHYKSLDHRSFYFKQQDSKNLS
TKSLVAEIKELKEKKQKEDDVLLAIAAGSRQTIVPHLEFEYSDVKVLEDLYKLVRYSCEE
VCSSKEQFNKVMRLWATFVEPMLGFSSRTPSSDGAEILGNAMCNITKCSASSRRGSDETS
DADAAKANLLQSKLRNNVDENASSGLAGVSKAALLDRDASAKENNSLVSERADRDDVVSD
TPHLSEKEPKDVDLSETVAASNVQVTANAQTRGCTPPLVSENSHERINVEAISGSCSSAL
PSHPKDTASKDHESKGIQDSVPLSEGNAVAKMSVHGILQDSVKISWNQVGTVEPSKFEKE
EGELSPNEEFEEENLEVYAANSLTETRRHIDRQEGRSGNLNHVAGQDGGDNDADADDEDS
ENVSETGGDVSGSDSAGDACSHEEPEEEEDLERDEADGKSESEGEAEGAADAHSVGGDSN
PLPLSERFLSSVKPLSKHVTTPLLNGGGKDSRLFYGNDNFYVLFRLHQILYERILSAKTS
SLCAEMKRRTLKDSCSSDPYARFMSVLYKLLDGTLENAKFEDACRDIIGNHSYILFTLDK
LIYKLVKQLQTVASEDMDNKLLQLYEYEKSRKQLIDAVYYENTRIFLHEENIYRLEFSSS
PSRMSIQLMDSISEKPEVFAISIDPNFADYLYNDFLSVFPGKKKLHDTFLLRNKRKYVSP
DESSALCMVMEGARIINGLECKIACNSSKISYVLDTEDLFFRPRWKKRRASSNTGFASSS
HNLAKIQKFNRFLSSS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggacgagggatgatgtgtaccctggttcgcaattcaaacggcctttcggttct
tctcgtggggagtactacgggcaatcccaagtaacagggacaggagctatggagaatgga
ggtggggttgttggtggaggtagcgcatcacagaaactaacgacaaatgacgcgttgacg
tacctcaaggaagtgaaggatatgtttcaagatcaaagggaaaagtacgacacgttcctc
gaggttatgaaagatttcaaggctcaaaggactgacactacaggagtcatagcaagagta
aaggaattatttaaagggcataacaaattaattctgggattcaatactttcttgccaaag
ggatttgaaatatcccccgacgaggatgaaacaccaataaaaaagaatgtggaatttgaa
gaagccatctcttttgttaataagatcaagaaacgcttccaaaatgatgagcatgtctat
aagtcatttttggacatcctcaataagtaccggaaggagcacaaggacattaatgaggtc
tatagtgaggttgaaaacctttttggcgaccatcaagacttacttgaggaattcaccaaa
ttcttgcctgataattcagcaacggcctccacacacaactttccttatgccaggaattca
tttcagcgtcaacatgaacgtagctctgctacaccgacattgcggcaaatgcaaattgat
aagcaacgagcgcggcgagataggattatcaatgctcatgctgagcatgatataaatgta
gatcgtcctgatttagacgatgataaagcaatgatcaaggtacagaaggatcaaagaaag
cgttttgagaaggataacagggacaggaggaaccgtgaagtggatgatagagaatctgag
catgacactagtagggatttcaactcacagcgctttcccgacaaaagaaaatctgcaagg
aaggttgaaaactatggaatgacttcttgtgaagacagggatgctctaaagagcatgtat
aaccaaggattcattttctgtgaaaaagtcaaggagagattgtgcagctcagatgattat
caggccttcttgaagtgccttcatatgtacagcagtgatattataaggaaaaatgactta
caaaatttggtgagagatctgcttggaaagcatcctgacctcatggaagaattcaatggc
tttttggagcgctgtgagaatattgatggctttcttgctggtattgtgagtaaaaggtcg
ctctctgctgatgggcacatgtcctggacagcaaaggctgaggataaagataaggaacat
aagcgcgagaatgatggagccaaagataaggaaagatgcaaagacaagtatatgttcaaa
tccattcaagagctggacttgtctaactgtcaacgctgtaccccaagttaccggcttctg
ccagatgattatccaattccttcagtcagccagaggtcagagcttggtgctcaagtgctc
aatgatcattgggtgtctgtgacatcaggtagtgaggattactctttcaaacacatgcgc
aggaatcagtatgaagaaagtttattcagatgtgaagatgacagatttgagctggacatg
ctgttagaatcagtgagctccactgcgaaaagggcagaggaagtctggaacaacatcaac
gagaatattaacaacttggagactcctattccaattgaaaattacttcactgctctcaat
ctacgatgcattgagcgtctgtatggcgaccacggtctggatgtaatggacatcctccga
aaaaatcctgctgttgcgttgcctgtcatgttgattcgcctgaagcagaaacaggaagaa
tggacaaggtgtcgttcagattttaacaagatttgggctgaaatttatgctaaaaaccac
tacaaatcgcttgatcatcgcagcttctatttcaagcagcaggattcaaagaacctaagt
acaaaatctttggtggctgagatcaaagaattgaaagaaaagaagcaaaaagaggatgat
gttctccttgccattgctgctggaagtagacaaactattgtcccacatttggagtttgaa
tactctgacgtaaaagttcttgaagatttgtataaacttgtccgatattcatgcgaagag
gtttgctcctccaaagagcagtttaataaagtaatgcgactttgggctacctttgtggag
ccaatgctgggattttcttctagaactcctagctctgatggtgctgaaattcttggaaat
gcaatgtgcaatattaccaaatgtagtgcatcaagcagaagaggaagtgatgaaacctct
gatgctgatgctgccaaagctaatttgctgcagtcaaaattgaggaacaacgtggatgag
aatgcctcatcaggactagcaggtgtcagcaaggccgctttgcttgacagagatgcttct
gctaaagaaaacaattctttagtttcagaacgtgcagatagagatgatgtagtgagcgat
actcctcatctttctgagaaggaaccaaaggatgtggatctgtccgagacagttgctgct
tccaatgttcaagttaccgccaatgcacaaacacgtgggtgcaccccgccacttgtttca
gagaacagtcatgagagaatcaatgtggaggcgatatcaggttcctgctccagtgctctt
ccatcccatcctaaggatactgccagcaaagaccatgaatccaaaggtattcaggactct
gtaccattatcggagggcaatgctgttgcaaaaatgagtgttcatggaatacttcaagat
agtgtgaaaatcagctggaatcaagtaggtactgttgaaccatccaaatttgaaaaagaa
gagggtgagttatcaccaaatgaggaatttgaggaggagaaccttgaggtgtatgcagcg
aactctctaaccgagacaagacgtcatattgacagacaagagggtcgatcaggtaacctc
aaccatgtagctggccaggatggtggagacaatgatgcagatgctgatgatgaagacagt
gaaaatgtttctgaaactggtggagatgtctcaggcagtgattctgccggagatgcatgc
tcccatgaagagcctgaagaggaggaggatttagagcgtgatgaagctgatggtaagtct
gagagtgaaggtgaggctgagggggctgctgatgcacactctgttggaggagatagcaac
ccattgcccctttcagaacgcttcctttcctcagtgaagcccctttcaaagcatgtaaca
actcctctgcttaatggaggggggaaagattcccggctattctatggaaatgacaatttc
tacgtgcttttcagacttcatcaaattctctatgaaagaattttatctgcaaaaacaagc
tcgctatgtgctgaaatgaagcgaagaactttgaaggattcatgttcttcagatccttat
gccagattcatgtctgtcctatacaaattgcttgatggtactcttgaaaatgcaaaattt
gaagatgcatgcagagatatcattggaaatcattcatacattctatttacgttggacaaa
ttgatatacaagttggtcaagcagcttcaaactgtagctagtgaggatatggacaacaag
ctccttcaattgtacgaatatgaaaaatctcggaaacagctaattgatgccgtgtattat
gagaacacgcgtatctttctccatgaggaaaacatatatcggttggaattttcatcctct
ccatctcgtatgtccatccagctgatggacagtataagcgaaaagcctgaggtttttgca
atttcaatagaccctaactttgctgattatctgtacaatgacttcctttcagtttttcct
ggcaaaaagaagctgcatgacacatttttgctaagaaacaaacggaaatatgtgagtccg
gatgaaagttctgctttgtgtatggtcatggaaggtgctagaatcatcaatggtttggaa
tgcaagatagcttgcaactcatcgaagatctcatacgttctagatacagaggatctcttc
tttcgcccaagatggaaaaaaagaagagcttcatcaaatacaggattcgcatcttcatct
cacaatctggcgaaaatacagaagtttaacagattcttgtcttcgtcatag
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